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bacteria:t3e:xopaf [2020/07/04 05:53] guidos |
bacteria:t3e:xopaf [2020/07/09 12:45] rkoebnik [Conservation] |
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Author: [[https:// | Author: [[https:// | ||
- | Internal reviewer: | + | Internal reviewer: |
Expert reviewer: FIXME | Expert reviewer: FIXME | ||
Class: XopAF\\ | Class: XopAF\\ | ||
Family: XopAF\\ | Family: XopAF\\ | ||
- | Prototype: AvrXv3 (// | + | Prototype: AvrXv3 (// |
RefSeq ID: [[https:// | RefSeq ID: [[https:// | ||
+ | Synonym: AvrXv3\\ | ||
3D structure: Unknown | 3D structure: Unknown | ||
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=== How discovered? === | === How discovered? === | ||
- | AvrXv3 was discovered by genetic screen and cloning and sequencing its encoding gene from // | + | AvrXv3 was discovered by genetic screen and cloning and sequencing its encoding gene from // |
=== (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
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=== Phenotypes === | === Phenotypes === | ||
- | Expression studies with a fusion of this gene and //uidA// indicated that avrXv3 is plant inducible and controlled by the hypersensitivity and pathogenicity (hrp) regulatory system. Mutational analysis and transcription activation assays revealed that AvrXv3 has transcription activation activity in yeast, and that the putative domain responsible for that activity is located at the C terminus of the AvrXv3 protein. // | + | Expression studies with a fusion of this gene and //uidA// indicated that avrXv3 is plant inducible and controlled by the hypersensitivity and pathogenicity (hrp) regulatory system. Mutational analysis and transcription activation assays revealed that AvrXv3 has transcription activation activity in yeast, and that the putative domain responsible for that activity is located at the C terminus of the AvrXv3 protein. // |
=== Localization === | === Localization === | ||
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Tomato RxvT3 resistance protein (has not been identified yet). | Tomato RxvT3 resistance protein (has not been identified yet). | ||
+ | |||
+ | ===== ===== | ||
===== Conservation ===== | ===== Conservation ===== | ||
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=== In xanthomonads === | === In xanthomonads === | ||
- | Yes (Washington //et al//., 2016). | + | Yes (//e.g.//, //X. alfalfae//, //X. citri//, //X. translucens// |
=== In other plant pathogens/ | === In other plant pathogens/ | ||
- | Yes (Washington //et al//., 2016). | + | Yes (// |
===== References ===== | ===== References ===== | ||
- | Astua-Monge G, Minsavage VG, Stall ER, Davis JM, Bonas U, Jones BJ (2000). Resistance of tomato and pepper to T3 strains of // | + | Astua-Monge G, Minsavage VG, Stall ER, Davis JM, Bonas U, Jones BJ (2000). Resistance of tomato and pepper to T3 strains of // |
- | <font 14px/ | + | Balaji V, Gibly A, Debbie P, Sessa G (2007). Transcriptional analysis of the tomato resistance response triggered by recognition of the // |
- | : 10.1007/ | + | |
- | Minsavage GV, Jones JB, Stall RE (1996). Cloning and sequencing of an avirulence gene (// | + | Minsavage GV, Jones JB, Stall RE (1996). Cloning and sequencing of an avirulence gene (// |
Roden AJ, Belt B, Ross BJ, Tachibana T, Vargas J, Mudgett BM (2004). A genetic screen to isolate type III effectors traslocated into pepper cells during // | Roden AJ, Belt B, Ross BJ, Tachibana T, Vargas J, Mudgett BM (2004). A genetic screen to isolate type III effectors traslocated into pepper cells during // | ||
Washington EJ, Mukhtar MS, Finkel MO, Wan L, Banfield JM, Kieber JJ, Dangl LJ (2016). // | Washington EJ, Mukhtar MS, Finkel MO, Wan L, Banfield JM, Kieber JJ, Dangl LJ (2016). // | ||
+ | |||
+ | ===== Further reading ===== | ||
+ | |||
+ | Gibly A, Bonshtien A, Balaji V, Debbie P, Martin GB, Sessa G (2004). Identification and expression profiling of tomato genes differentially regulated during a resistance response to // | ||
+ | |||
+ | Jalan N, Kumar D, Andrade MO, Yu F, Jones JB, Graham JH, White FF, Setubal JC, Wang N (2013). Comparative genomic and transcriptome analyses of pathotypes of // | ||
+ | |||
+ | Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes of Xanthomonas perforans identifies candidate targets for resistance breeding in tomato. Phytopathology 106: 1097-1104. DOI: [[https:// | ||