EuroXanth DokuWiki

User Tools

Site Tools

Trace:
bacteria:t3e:xopap

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision 		Previous revision
Last revision Both sides next revision
bacteria:t3e:xopap [2020/08/02 23:46]
jfpothier 		bacteria:t3e:xopap [2020/11/27 07:09]
doron.teper [References]
Line 1: Line 1:
 +
 +
 +----
 +
 ====== XopAP ====== ====== XopAP ======
  
 Author: [[https://www.researchgate.net/profile/Saul_Burdman|Saul Burdman]]\\ Author: [[https://www.researchgate.net/profile/Saul_Burdman|Saul Burdman]]\\
 Internal reviewer: [[https://www.researchgate.net/profile/Joel_Pothier2|Joël F. Pothier]]\\ Internal reviewer: [[https://www.researchgate.net/profile/Joel_Pothier2|Joël F. Pothier]]\\
-Expert reviewer: FIXME+Expert reviewer: [[https://www.researchgate.net/profile/Doron_Teper|Doron Teper]]
  
 Class: XopAP\\ Class: XopAP\\
Line 10: Line 14:
 RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ24869.1|CAJ24869.1]] (464 aa)\\ RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ24869.1|CAJ24869.1]] (464 aa)\\
 3D structure: Unknown 3D structure: Unknown
 +
 +=====   =====
  
 ===== Biological function ===== ===== Biological function =====
Line 21: Line 27:
 === Regulation === === Regulation ===
  
-Unknown. In //X. euvesicatoria// strain 85-10, the //xopAP// gene does not contain a PIP-box motif in its promoter region (Teper //et al//., 2016).+In //X. euvesicatoria// strain 85-10, the //xopAP// gene does not contain a PIP-box motif in its promoter region (Teper //et al//., 2016). //xopAP //in // X. citri //pv. // citri //is positively regulated by the stringent response regulators RelA and SpoT (Zhang et al. 2019).
 === Phenotypes === === Phenotypes ===
  
Line 32: Line 38:
 === Enzymatic function === === Enzymatic function ===
  
-Unknown. XopAL contains a putative lipase domain (lipase class 3 family domain; conserved protein domain family [[https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PLN03037|PLN03037]]) in amino acid positions 236-322 (Teper //et al//., 2016).+Unknown. XopAP contains a putative lipase domain (lipase class 3 family domain; conserved protein domain family [[https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PLN03037|PLN03037]]) in amino acid positions 236-322 (Teper //et al//., 2016).
 === Interaction partners === === Interaction partners ===
  
Line 62: Line 68:
  
 Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria// type III effector proteins by a machine-learning approach. Mol. Plant Pathol. 17: 398-411. DOI: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]] Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria// type III effector proteins by a machine-learning approach. Mol. Plant Pathol. 17: 398-411. DOI: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
 +
 +Zhang Y, Teper D, Xu J, Wang N (2019). Stringent response regulators (p)ppGpp and DksA positively regulate virulence and host adaptation of Xanthomonas citri. Mol. Plant Pathol. 20:1550-1565. DOI: [[https://bsppjournals.onlinelibrary.wiley.com/doi/full/10.1111/mpp.12865|10.1111/mpp.12865. ]]
  
bacteria/t3e/xopap.txt · Last modified: 2021/01/25 21:41 by rkoebnik

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki