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bacteria:t3e:xopax

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bacteria:t3e:xopax [2020/11/26 20:51]
doron.teper 		bacteria:t3e:xopax [2020/12/02 23:37] (current)
jfpothier
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 Class: XopAX\\ Class: XopAX\\
 Family: XopAX\\ Family: XopAX\\
-Prototype: XopAX (//Xanthomonas//; strain)\\+Prototype: XCVd0086 (//X. euvesicatoria// strain 85-10)\\
 RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/78033899|CAJ19898 ]]\\ RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/78033899|CAJ19898 ]]\\
 3D structure: Unknown 3D structure: Unknown
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 === How discovered? === === How discovered? ===
  
-XopAX ( XCVd0086 in //X. euvesicatoria// strain 85-10; GenBank [[https://www.ncbi.nlm.nih.gov/protein/78033899|CAJ19898 ]]) was discovered using a machine-learning approach (Teper //et al//., 2016).+XopAX (XCVd0086 in //X. euvesicatoria// strain 85-10; GenBank [[https://www.ncbi.nlm.nih.gov/protein/78033899|CAJ19898]]) was discovered using a machine-learning approach (Teper //et al//., 2016).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
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 === Regulation === === Regulation ===
  
-Unknown+Unknown.
  
 === Phenotypes === === Phenotypes ===
  
-Unknown+Unknown.
  
 === Localization === === Localization ===
  
-Unknown+Unknown.
  
 === Enzymatic function === === Enzymatic function ===
  
-Unknown+Unknown.
  
 === Interaction partners === === Interaction partners ===
  
-Unknown+Unknown.
  
 ===== Conservation ===== ===== Conservation =====
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 === In xanthomonads === === In xanthomonads ===
  
-YES (//X. euvevsicatoria, X. campestris //pv. //campestris, X. arboricola//)+Yes (//X. euvevsicatoria, X. campestris //pv. //campestris, X. arboricola//).
 === In other plant pathogens/symbionts === === In other plant pathogens/symbionts ===
  
-YES (//Pseudomonas syringae// pv. //aceris//) +Yes (//Pseudomonas syringae// pv. //aceris//).
 ===== References ===== ===== References =====
  
 Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria// type III effector proteins by a machine-learning approach. Mol. Plant Pathol. 17: 398-411. DOI: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]] Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria// type III effector proteins by a machine-learning approach. Mol. Plant Pathol. 17: 398-411. DOI: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
  
bacteria/t3e/xopax.1606420270.txt.gz · Last modified: 2020/11/26 20:51 by doron.teper

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