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bacteria:t3e:xopk

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bacteria:t3e:xopk [2020/07/08 19:21]
rkoebnik 		bacteria:t3e:xopk [2020/12/06 21:50]
rbart_danforthcenter.org
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 +====== XopK ======
 +
 +Author: [[https://www.researchgate.net/profile/Joel_Pothier2|Joël F. Pothier]] & Trainees from the 2<sup>nd</sup>  EuroXanth Training School ([[https://www.researchgate.net/profile/Amandine_Cunty|Amandine Cunty]], [[https://www.researchgate.net/profile/Filip_Gazdik|Filip Gazdik]], [[https://www.researchgate.net/profile/Leonor_Martins|Leonor Martins]], Cinzia Van Malderghem, Esther Van Veen)\\
 +Internal reviewer: [[https://www.researchgate.net/profile/Alexandre_Menezes6|Alexandre B. de Menezes]]\\
 +Expert reviewer: Rebecca Bart
 +
 +Class: XopK\\
 +Family: XopK\\
 +Prototype: XOO1669 (//Xanthomonas oryzae// pv. //oryzae//; strain T7174R)\\
 +RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/WP_027703763.1|WP_027703763.1]] (843 aa)\\
 +3D structure: Unknown
 +
 ===== Biological function ===== ===== Biological function =====
  
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 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  
-Mutation of a putative ubiquitin-conjugation enzyme (E2) binding site abolished XopK-induced degradation of rice somatic receptor kinase 2 (OsSERK2) and compromised XopK-dependent virulence (Qin //et al//., 2018).+Mutation of a putative ubiquitin-conjugation enzyme (E2) binding site abolished XopK-induced degradation of rice somatic receptor kinase 2 (OsSERK2) and compromised XopK-dependent virulence (Qin //et al//., 2018). Expression of XopK is HrpX-dependent (Furutani //et al//., 2006) and was observed to translocate using a Cya reporter system (Furutani //et al//., 2009).
 === Regulation === === Regulation ===
  
Line 43: Line 55:
  
 Furutani A, Nakayama T, Ochiai H, Kaku H, Kubo Y, Tsuge S (2006). Identification of novel HrpXo regulons preceded by two //cis//-acting elements, a plant-inducible promoter box and a -10 box-like sequence, from the genome database of //Xanthomonas oryzae//  pv. oryzae. FEMS Microbiol. Lett. 259: 133-141. DOI: [[https://doi.org/10.1111/j.1574-6968.2006.00265.x|10.1111/j.1574-6968.2006.00265.x]] Furutani A, Nakayama T, Ochiai H, Kaku H, Kubo Y, Tsuge S (2006). Identification of novel HrpXo regulons preceded by two //cis//-acting elements, a plant-inducible promoter box and a -10 box-like sequence, from the genome database of //Xanthomonas oryzae//  pv. oryzae. FEMS Microbiol. Lett. 259: 133-141. DOI: [[https://doi.org/10.1111/j.1574-6968.2006.00265.x|10.1111/j.1574-6968.2006.00265.x]]
 +
 +Furutani A, Takaoka M, Sanada H, Noguchi Y, Oku T, Tsuno K, Ochiai H, Tsuge S (2009). Identification of novel type III secretion effectors in //Xanthomonas oryzae//  pv. //oryzae//. Mol. Plant Microbe Interact. 22: 96-106. DOI: [[https://doi.org/10.1094/MPMI-22-1-0096|10.1094/MPMI-22-1-0096]] FIXME  → Needs to be added to "Experimental evidence"
  
 Liu Y, Long J, Shen D, Song C (2016). //Xanthomonas oryzae//  pv. //oryzae//  requires H-NS-family protein XrvC to regulate virulence during rice infection. FEMS Microbiol. Lett. 363: fnw067. DOI: [[https://doi.org/10.1093/femsle/fnw067|10.1093/femsle/fnw067]] Liu Y, Long J, Shen D, Song C (2016). //Xanthomonas oryzae//  pv. //oryzae//  requires H-NS-family protein XrvC to regulate virulence during rice infection. FEMS Microbiol. Lett. 363: fnw067. DOI: [[https://doi.org/10.1093/femsle/fnw067|10.1093/femsle/fnw067]]
bacteria/t3e/xopk.txt · Last modified: 2020/12/06 21:56 by rbart_danforthcenter.org

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