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plant:ryegrass [2020/07/01 15:15] rkoebnik [Resistance gene: major LG4 QTL] |
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- | ====== Italian ryegrass (//Lolium multiflorum// | ||
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- | Author: Florian Goettelmann\\ | ||
- | Internal reviewer: Jaroslav Michalko\\ | ||
- | Expert reviewer: FIXME | ||
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- | ===== Pathogen: // | ||
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- | ==== Resistance gene: major LG4 QTL ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA//. | ||
- | === Source === | ||
- | |||
- | M2289. | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG4. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | LpSSRK05A11 (SSR), P38M50_252 (AFLP). | ||
- | |||
- | === Brief description === | ||
- | |||
- | Explained 66.8% of resistance in one greenhouse experiment and < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Resistance gene: major LG4 QTL ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA// | ||
- | === Source === | ||
- | |||
- | M2289. | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG4. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | < | ||
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- | === Brief description === | ||
- | |||
- | Explained 10.8% of resistance in one field experiment (Studer //et al.//, 2006). | ||
- | |||
- | ---- | ||
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- | ==== Resistance gene: minor LG1 QTL ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA// | ||
- | === Source === | ||
- | |||
- | M2289. | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG1. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | < | ||
- | |||
- | === Brief description === | ||
- | |||
- | Explained < | ||
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- | ---- | ||
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- | ==== Resistance gene: minor LG5 QTL ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA// | ||
- | === Source === | ||
- | |||
- | M2289. | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG5. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | E41M47_133 (AFLP). | ||
- | |||
- | === Brief description === | ||
- | |||
- | Explained 7.4% of resistance in one glasshouse experiment< | ||
- | |||
- | ---- | ||
- | |||
- | ==== Resistance gene: minor LG6 QTL ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA// | ||
- | === Source === | ||
- | |||
- | M2289. | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG6. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | E39M50_196 (AFLP). | ||
- | |||
- | === Brief description === | ||
- | |||
- | Explained 7.3% of resistance in one field experiment< | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate genes ==== | ||
- | |||
- | ==== Candidate gene: F-BstCA-MseCG-188 F-BstCT-MseCA-188 — Jaroslav Michalko 2020/06/18 15:08 — ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | CX066043. | ||
- | |||
- | === Source === | ||
- | |||
- | « genotype A » (advanced breeding germplasm, Agroscope FAL Reckenholz, Switzerland). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Showed homology to an ERBP transcription factor in //Oryza sativa// < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: F-BstTT-MseGG-159 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | CX066053. | ||
- | |||
- | === Source === | ||
- | |||
- | « genotype A » (advanced breeding germplasm, Agroscope FAL Reckenholz, Switzerland). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Showed homology to < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: F-BstCG-MseGT-220 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | CX066037. | ||
- | |||
- | === Source === | ||
- | |||
- | « genotype A » (advanced breeding germplasm, Agroscope FAL Reckenholz, Switzerland). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Showed homology to < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: F-BstCA-MseTG-50 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | CX066030. | ||
- | |||
- | === Source === | ||
- | |||
- | « genotype A » (advanced breeding germplasm, Agroscope FAL Reckenholz, Switzerland). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Showed homology to guanine nucleotide-binding protein beta (GB1) in //Oryza sativa// < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: // | ||
- | |||
- | === Synonyms === | ||
- | |||
- | Lsi1. | ||
- | |||
- | === Source === | ||
- | |||
- | LmB-01 (Syn1 progeny). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Belongs to the nodulin26-like intrinsic protein family of aquaporins < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: r_010d_c02 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA//. | ||
- | === Source === | ||
- | |||
- | LmB-01 (Syn1 progeny). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Belongs to the germin-like proteins family< | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: rg6_008b_d08 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA// | ||
- | === Source === | ||
- | |||
- | LmB-01 (Syn1 progeny). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG4. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Belongs to the < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: ve_007b_e10 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | MFS18. | ||
- | |||
- | === Source === | ||
- | |||
- | LmB-01 (Syn1 progeny). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Flowering gene< | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: gsa_007c_h09 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | MFS18. | ||
- | |||
- | === Source === | ||
- | |||
- | LmB-01 (Syn1 progeny). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Identified. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | //NA// | ||
- | === Brief description === | ||
- | |||
- | Ankyrin (ANK) repeat protein< | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: AT5G47850; CRINKLY4-related protein — Jaroslav Michalko 2020/06/18 15:35 — ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA// | ||
- | === Source === | ||
- | |||
- | Xtg-ART (M2289 x Adret). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG4. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | SNP markers. | ||
- | |||
- | === Brief description === | ||
- | |||
- | Serine/ | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: AT3G07960; SWEET17 — Jaroslav Michalko 2020/06/18 15:37 — ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | //NA// | ||
- | === Source === | ||
- | |||
- | Xtg-ART (M2289 x Adret). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG4. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | SNP markers. | ||
- | |||
- | === Brief description === | ||
- | |||
- | Belongs to the nodulin MtN3 family protein < | ||
- | |||
- | ---- | ||
- | |||
- | ==== Candidate gene: Brassinosteroid Insensitive 1 (BRI1)-associated kinase-interacting receptor-like kinase 1 ==== | ||
- | |||
- | === Synonyms === | ||
- | |||
- | BAK1. | ||
- | |||
- | === Source === | ||
- | |||
- | Xtg-ART (M2289 x Adret). | ||
- | |||
- | === Status (identified, | ||
- | |||
- | Mapped on LG4. | ||
- | |||
- | === Molecular markers === | ||
- | |||
- | SNP markers. | ||
- | |||
- | === Brief description === | ||
- | |||
- | Belongs to the< | ||
- | |||
- | ---- | ||
- | |||
- | ===== References ===== | ||
- | |||
- | < | ||
- | |||
- | < | ||
- | |||
- | < | ||
- | |||
- | < | ||
- | |||
- | ---- | ||
- | |||
- | ===== Further reading ===== | ||
- | |||
- | Sapkota S, Mergoum M, Liu Z (2020). The translucens group of // | ||