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- | ====== XopJ5 ====== | ||
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- | Author: [[https:// | ||
- | Internal reviewer: [[https:// | ||
- | Expert reviewer: FIXME | ||
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- | Class: XopJ\\ | ||
- | Family: XopJ5\\ | ||
- | Prototype: AvrXccB (// | ||
- | RefSeq ID: [[https:// | ||
- | Synonym: AvrXccB\\ | ||
- | 3D structure: Unknown | ||
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- | ===== Biological function ===== | ||
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- | In // | ||
- | === How discovered? === | ||
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- | Original discovery was through bioinformatic predictions and comparative genomics of // | ||
- | === (Experimental) evidence for being a T3E === | ||
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- | T3E-defective mutant was not capable of secreting the effector protein when carrying the plasmid-borne gene encoding for AvrXccB. | ||
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- | === Regulation === | ||
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- | The //xopE1// < | ||
- | === Phenotypes === | ||
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- | AvrXccB (XopJ5< | ||
- | === Localization === | ||
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- | Membrane, confirmed experimentally through GFP-tagged AvrXccB expression in transgenic // | ||
- | === Enzymatic function === | ||
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- | Cysteine protease/ | ||
- | === Interaction partners === | ||
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- | AvrXccB interacts with SAM-MT1 in // | ||
- | ===== Conservation ===== | ||
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- | === In xanthomonads === | ||
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- | Yes. YopJ-like effectors such as AvrBsT in //Xcv// or //Xcc//, XopJ in //Xcv//. | ||
- | === In other plant pathogens/ | ||
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- | Yes. YopJ-like effectors HopZ1a in //P. syringae// and Pop2 in //R. solanacearum// | ||
- | ===== References ===== | ||
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- | da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El-Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA, Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos Santos M, Truffi D, Tsai SM, White FF, Setubal JC, Kitajima JP (2002). Comparison of the genomes of two // | ||
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- | Jiang W, Jiang BL, Xu RQ, Huang JD, Wei HY, Jiang GF, Cen WJ, Liu J, Ge YY, Li GH, Su LL, Hang XH, Tang DJ, Lu GT, Feng JX, He YQ, Tang JL (2009). Identification of six type III effector genes with the PIP box in // | ||
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- | Liu L, Wang Y, Cui F, Fang A, Wang S, Wang J, Wei C, Li S, Sun W (2017). The type III effector AvrXccB in // | ||
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- | Rongqi X, Xianzhen L, Hongyu W, Bole J, Kai L, Yongqiang H, Jiaxuan F, Jiliang T (2006). Regulation of eight //avr// by //hrpG// and //hrpX// in // | ||
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- | Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from // | ||
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- | ===== Further reading ===== | ||
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- | Guy E, Genissel A, Hajri A, Chabannes M, David P, Carrere S, Lautier M, Roux B, Boureau T, Arlat M, Poussier S, Noël LD (2013). Natural genetic variation of // | ||