EuroXanth DokuWiki

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====== References Database ======

====== Overview ======

This page is supposed to hold all citations used anywhere in the Dokuwiki. It is supposed to be divided into sections if appropriate. Enter records in [[http://www.bibtex.org/Format/|bibtex]] format between tags. Citation can be included at any page by typing
<code>

[(:euroxanth:name)]

</code>

where ''"name"'' is the identifier of the citation in the bibtex record. Please use ''":euroxanth:"'' namespace everywhere and use following self-explanatory scheme for citation ''"name"'': ''authorYEARfirst_unique_words_of_title''. E.g.:
<code>
@Comment{refnotes,
  namespace = ":euroxanth"
}
@Book{Blank2005,
    url="http://www.amazon.co.uk/Four-Steps-Epiphany-Steven-Blank/dp/0976470705",
    published="2005",
    title="The four steps to the epiphany",
    authors="Blank, S.G."
}
@Misc{Doe1999,
    url="http://example.com",
    published="1999",
    title="Something happened to me",
    authors="Doe, J."
}

</code>

You should always specify the first author. If you are uncertain in year, use underscore instead, e.g. Srinivasan_engineering, but don't forget to specify enough words (separated by underscores), to obtain a unique identifier.

See [[https://www.dokuwiki.org/plugin:refnotes:syntax|refnotes plugin]] documentation for further details.

====== Bib entry from DOI ======

If you happen to know the DOI of a publication and want to obtain a bib entry, go to the [[http://www.doi2bib.org/#/doi|doi2bib service]] and type in your DOI.

====== Type 3 effectors publications ======

<code bibtex>
@Comment{refnotes,
  namespace = ":euroxanth"
}

@Article{Thieme2005,
  author    = "Thieme F and Koebnik R and Bekel T and Berger C and Boch J and Buttner D and Caldana C and Gaigalat L and Goesmann A and Kay S and Kirchner O and Lanz C and Linke B and McHardy AC and Meyer F and Mittenhuber G and Nies DH and Niesbach-Klosgen U and Patschkowski T and Ruckert C and Rupp O and Schneiker S and Schuster SC and Vorholter FJ and Weber E and Puhler A and Bonas U and Bartels D and Kaiser O",
  ref-author= "Thieme et al.",
  title     = "Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence",
  journal   = "J. Bacteriol.",
  volume    = "187(21)",
  year      = 2005,
  pages     = "7254-7266",
  doi       = "10.1128/JB.187.21.7254-7266.2005",
  url       = "https://dx.doi.org/10.1128%2FJB.187.21.7254-7266.2005"
}

@Article{Dahlbeck1979,
  author    = "Dahlbeck D and Stall RE",
  ref-author= "Dahlbeck & Stall",
  title     = "Mutations for change of race in cultures of Xanthomonas vesicatoria",
  journal   = "Phytopathology",
  volume    = "69",
  year      = 1979,
  pages     = "634-636",
  url       = "https://www.apsnet.org/publications/phytopathology/backissues/Documents/1979Articles/Phyto69n06_634.PDF"
}

@article{RN70,
  author    = "Astua-Monge, Gustavo and Minsavage, Gerald V. and Stall, Robert E. and Davis, Michael J. and Bonas, Ulla and Jones, Jeffrey B.",
  ref-author= "RN70",
  title     = "Resistance of Tomato and Pepper to T3 Strains of Xanthomonas campestris pv. Vesicatoria Is Specified by a Plant-Inducible Avirulence Gene",
  journal   = "Molecular Plant-Microbe Interactions",
  volume    = "13",
  number    = "9",
  pages     = "911-921",
  DOI       = "10.1094/mpmi.2000.13.9.911",
  url       = "https://apsjournals.apsnet.org/doi/abs/10.1094/MPMI.2000.13.9.911",
  year      = "2000",
  type      = "Journal Article"
}

@article{RN80,
author = {Bahadur, Ranjit Prasad and Basak, Jolly},
title = {Molecular modeling of protein-protein interaction to decipher the structural mechanism of nonhost resistance in rice},
journal = {Journal of biomolecular structure & dynamics},
volume = {32},
number = {4},
pages = {669-681},
ISSN = {0739-1102},
DOI = {10.1080/07391102.2013.787370},
url = {http://europepmc.org/abstract/MED/23659345
https://doi.org/10.1080/07391102.2013.787370},
year = {2014},
type = {Journal Article}
}

@article{RN88,
author = {Barak, Jeri D. and Vancheva, Taca and Lefeuvre, Pierre and Jones, Jeffrey B. and Timilsina, Sujan and Minsavage, Gerald V. and Vallad, Gary E. and Koebnik, Ralf},
title = {Whole-Genome Sequences of Xanthomonas euvesicatoria Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors},
journal = {Frontiers in Plant Science},
volume = {7},
number = {1805},
ISSN = {1664-462X},
DOI = {10.3389/fpls.2016.01805},
url = {https://www.frontiersin.org/article/10.3389/fpls.2016.01805},
year = {2016},
type = {Journal Article}
}

@article{RN48,
author = {Boch, Jens and Bonas, Ulla},
title = {Xanthomonas AvrBs3 Family-Type III Effectors: Discovery and Function},
journal = {Annual Review of Phytopathology},
volume = {48},
number = {1},
pages = {419-436},
DOI = {10.1146/annurev-phyto-080508-081936},
url = {https://www.annualreviews.org/doi/abs/10.1146/annurev-phyto-080508-081936},
year = {2010},
type = {Journal Article}
}

@article{RN31,
author = {Boch, Jens and Scholze, Heidi and Schornack, Sebastian and Landgraf, Angelika and Hahn, Simone and Kay, Sabine and Lahaye, Thomas and Nickstadt, Anja and Bonas, Ulla},
title = {Breaking the Code of DNA Binding Specificity of TAL-Type III Effectors},
journal = {Science},
volume = {326},
number = {5959},
pages = {1509-1512},
DOI = {10.1126/science.1178811},
url = {https://science.sciencemag.org/content/sci/326/5959/1509.full.pdf},
year = {2009},
type = {Journal Article}
}

@article{RN94,
author = {Bocsanczy, A. M. and Schneider, D. J. and DeClerck, G. A. and Cartinhour, S. and Beer, S. V.},
title = {HopX1 in Erwinia amylovora Functions as an Avirulence Protein in Apple and Is Regulated by HrpL},
journal = {Journal of Bacteriology},
volume = {194},
number = {3},
pages = {553-560},
DOI = {10.1128/jb.05065-11},
url = {https://jb.asm.org/content/jb/194/3/553.full.pdf},
year = {2012},
type = {Journal Article}
}

@article{RN92,
author = {Bogdanove, Adam J. and Koebnik, Ralf and Lu, Hong and Furutani, Ayako and Angiuoli, Samuel V. and Patil, Prabhu B. and Van Sluys, Marie-Anne and Ryan, Robert P. and Meyer, Damien F. and Han, Sang-Wook and Aparna, Gudlur and Rajaram, Misha and Delcher, Arthur L. and Phillippy, Adam M. and Puiu, Daniela and Schatz, Michael C. and Shumway, Martin and Sommer, Daniel D. and Trapnell, Cole and Benahmed, Faiza and Dimitrov, George and Madupu, Ramana and Radune, Diana and Sullivan, Steven and Jha, Gopaljee and Ishihara, Hiromichi and Lee, Sang-Won and Pandey, Alok and Sharma, Vikas and Sriariyanun, Malinee and Szurek, Boris and Vera-Cruz, Casiana M. and Dorman, Karin S. and Ronald, Pamela C. and Verdier, Valérie and Dow, J. Maxwell and Sonti, Ramesh V. and Tsuge, Seiji and Brendel, Volker P. and Rabinowicz, Pablo D. and Leach, Jan E. and White, Frank F. and Salzberg, Steven L.},
title = {Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic <span class="named-content genus-species" id="named-content-1">Xanthomonas</span> spp},
journal = {Journal of Bacteriology},
volume = {193},
number = {19},
pages = {5450-5464},
DOI = {10.1128/jb.05262-11},
url = {https://jb.asm.org/content/jb/193/19/5450.full.pdf},
year = {2011},
type = {Journal Article}
}

@article{RN25,
author = {Bonas, Ulla and Schulte, Ralf and Fenselau, Stefan and Minsavage, Gerald V. and Staskawicz, Brian J. and Stall, Robert E.},
title = {Isolation of a Gene Cluster from Xanthomonas campestris pv. vesicatoria that Determines Pathogenicity and the Hypersensitive Response on Pepper and Tomato},
journal = {Molecular Plant-Microbe Interactions},
volume = {4},
pages = {81-88},
DOI = {10.1094/MPMI-4-081},
year = {1991},
type = {Journal Article}
}

@article{RN24,
author = {Bonas, Ulla and Stall, Robert E. and Staskawicz, Brian},
title = {Genetic and structural characterization of the avirulence gene avrBs3 from Xanthomonas campestris pv. vesicatoria},
journal = {Molecular and General Genetics MGG},
volume = {218},
number = {1},
pages = {127-136},
ISSN = {1432-1874},
DOI = {10.1007/BF00330575},
url = {https://doi.org/10.1007/BF00330575},
year = {1989},
type = {Journal Article}
}

@article{RN27,
author = {Bonas, Ulla and Van den Ackerveken, Guido},
title = {Gene-for-gene interactions: bacterial avirulence proteins specify plant disease resistance},
journal = {Current Opinion in Microbiology},
volume = {2},
number = {1},
pages = {94-98},
ISSN = {1369-5274},
DOI = {10.1016/S1369-5274(99)80016-2},
url = {http://www.sciencedirect.com/science/article/pii/S1369527499800162},
year = {1999},
type = {Journal Article}
}

@article{RN41,
author = {Büttner, Daniela},
title = {Behind the lines–actions of bacterial type III effector proteins in plant cells},
journal = {FEMS Microbiology Reviews},
volume = {40},
number = {6},
pages = {894-937},
ISSN = {0168-6445},
DOI = {10.1093/femsre/fuw026},
url = {https://doi.org/10.1093/femsre/fuw026},
year = {2016},
type = {Journal Article}
}

@article{RN49,
author = {Büttner, Daniela and Bonas, Ulla},
title = {Regulation and secretion of Xanthomonas virulence factors},
journal = {FEMS Microbiology Reviews},
volume = {34},
number = {2},
pages = {107-133},
ISSN = {0168-6445},
DOI = {10.1111/j.1574-6976.2009.00192.x},
url = {https://doi.org/10.1111/j.1574-6976.2009.00192.x},
year = {2010},
type = {Journal Article}
}

@article{RN14,
author = {Casper-Lindley, Catharina and Dahlbeck, Douglas and Clark, Eszter T. and Staskawicz, Brian J.},
title = {Direct biochemical evidence for type III secretion-dependent translocation of the AvrBs2 effector protein into plant cells},
journal = {Proceedings of the National Academy of Sciences},
volume = {99},
number = {12},
pages = {8336-8341},
DOI = {10.1073/pnas.122220299},
url = {https://www.pnas.org/content/pnas/99/12/8336.full.pdf},
year = {2002},
type = {Journal Article}
}

@article{RN74,
author = {Castañeda, Adriana and Reddy, Joseph D. and El-Yacoubi, Basma and Gabriel, Dean W.},
title = {Mutagenesis of all Eight avr Genes in Xanthomonas campestris pv. campestris Had No Detected Effect on Pathogenicity, But One avr Gene Affected Race Specificity},
journal = {Molecular Plant-Microbe Interactions},
volume = {18},
number = {12},
pages = {1306-1317},
DOI = {10.1094/mpmi-18-1306},
url = {https://apsjournals.apsnet.org/doi/abs/10.1094/MPMI-18-1306},
year = {2005},
type = {Journal Article}
}

@article{RN53,
author = {Cerutti, Aude and Jauneau, Alain and Auriac, Marie-Christine and Lauber, Emmanuelle and Martinez, Yves and Chiarenza, Serge and Leonhardt, Nathalie and Berthomé, Richard and Noel, Laurent D.},
title = {Immunity at cauliflower hydathodes controls infection by Xanthomonas campestris pv. campestris},
journal = {Plant Physiology},
pages = {pp.01852.2016},
DOI = {10.1104/pp.16.01852},
url = {http://www.plantphysiol.org/content/plantphysiol/early/2017/02/09/pp.16.01852.full.pdf},
year = {2017},
type = {Journal Article}
}

@article{RN21,
author = {Coplin, David L.},
title = {Plasmids and Their Role in the Evolution of Plant Pathogenic Bacteria},
journal = {Annual Review of Phytopathology},
volume = {27},
number = {1},
pages = {187-212},
DOI = {10.1146/annurev.py.27.090189.001155},
url = {https://www.annualreviews.org/doi/abs/10.1146/annurev.py.27.090189.001155},
year = {1989},
type = {Journal Article}
}

@article{RN1,
author = {Dahlbeck, D. and Stall, R.E.},
title = {Mutations for Change of Race in Cultures of Xanthomonas vesicatoria},
journal = {Phytopathology},
volume = {69},
pages = {634-636},
DOI = {10.1094/Phyto-69-634},
year = {1979},
type = {Journal Article}
}

@article{RN97,
author = {Dalio, Ronaldo J. D. and Magalhães, Diogo M. and Rodrigues, Carolina M. and Arena, Gabriella D. and Oliveira, Tiago S. and Souza-Neto, Reinaldo R. and Picchi, Simone C. and Martins, Paula M. M. and Santos, Paulo J. C. and Maximo, Heros J. and Pacheco, Inaiara S. and De Souza, Alessandra A. and Machado, Marcos A.},
title = {PAMPs, PRRs, effectors and R-genes associated with citrus–pathogen interactions},
journal = {Annals of Botany},
volume = {119},
number = {5},
pages = {749-774},
ISSN = {0305-7364},
DOI = {10.1093/aob/mcw238},
url = {https://doi.org/10.1093/aob/mcw238},
year = {2017},
type = {Journal Article}
}

@article{RN46,
author = {Dean, Paul},
title = {Functional domains and motifs of bacterial type III effector proteins and their roles in infection},
journal = {FEMS Microbiology Reviews},
volume = {35},
number = {6},
pages = {1100-1125},
ISSN = {0168-6445},
DOI = {10.1111/j.1574-6976.2011.00271.x},
url = {https://doi.org/10.1111/j.1574-6976.2011.00271.x},
year = {2011},
type = {Journal Article}
}

@article{RN44,
author = {Doyle, Erin L. and Stoddard, Barry L. and Voytas, Daniel F. and Bogdanove, Adam J.},
title = {TAL effectors: highly adaptable phytobacterial virulence factors and readily engineered DNA-targeting proteins},
journal = {Trends in Cell Biology},
volume = {23},
number = {8},
pages = {390-398},
ISSN = {0962-8924},
DOI = {https://doi.org/10.1016/j.tcb.2013.04.003},
url = {http://www.sciencedirect.com/science/article/pii/S0962892413000573},
year = {2013},
type = {Journal Article}
}

@article{RN59,
author = {Escalon, Aline and Javegny, Stéphanie and Vernière, Christian and Noël, Laurent D. and Vital, Karine and Poussier, Stéphane and Hajri, Ahmed and Boureau, Tristan and Pruvost, Olivier and Arlat, Matthieu and Gagnevin, Lionel},
title = {Variations in type III effector repertoires, pathological phenotypes and host range of Xanthomonas citri pv. citri pathotypes},
journal = {Molecular Plant Pathology},
volume = {14},
number = {5},
pages = {483-496},
ISSN = {1464-6722},
DOI = {10.1111/mpp.12019},
url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/mpp.12019},
year = {2013},
type = {Journal Article}
}

@article{RN2,
author = {Escolar, Lucia and Van Den Ackerveken, Guido and Pieplow, Sylvia and Rossier, Ombeline and Bonas, Ulla},
title = {Type III secretion and in planta recognition of the Xanthomonas avirulence proteins AvrBs1 and AvrBsT},
journal = {Molecular Plant Pathology},
volume = {2},
number = {5},
pages = {287-296},
ISSN = {1464-6722},
DOI = {10.1046/j.1464-6722.2001.00077.x},
url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1046/j.1464-6722.2001.00077.x},
year = {2001},
type = {Journal Article}
}

@article{RN55,
author = {Feng, Feng and Yang, Fan and Rong, Wei and Wu, Xiaogang and Zhang, Jie and Chen, She and He, Chaozu and Zhou, Jian-Min},
title = {A Xanthomonas uridine 5′-monophosphate transferase inhibits plant immune kinases},
journal = {Nature},
volume = {485},
number = {7396},
pages = {114-118},
ISSN = {1476-4687},
DOI = {10.1038/nature10962},
url = {https://doi.org/10.1038/nature10962},
year = {2012},
type = {Journal Article}
}

@article{RN99,
author = {Ferreira, Marisa A. S. V. and Bonneau, Sophie and Briand, Martial and Cesbron, Sophie and Portier, Perrine and Darrasse, Armelle and Gama, Marco A. S. and Barbosa, Maria Angélica G. and Mariano, Rosa de L. R. and Souza, Elineide B. and Jacques, Marie-Agnès},
title = {Xanthomonas citri pv. viticola Affecting Grapevine in Brazil: Emergence of a Successful Monomorphic Pathogen},
journal = {Frontiers in Plant Science},
volume = {10},
number = {489},
ISSN = {1664-462X},
DOI = {10.3389/fpls.2019.00489},
url = {https://www.frontiersin.org/article/10.3389/fpls.2019.00489},
year = {2019},
type = {Journal Article}
}

@phdthesis{RN107,
author = {Garita-Cambronero, J},
title = {Genómica comparativa de cepas de Xanthomonas arborícola asociadas a Prunus ssp. Caracterización de los procesos de infección de la mancha bacteriana de frutales de hueso y almendro},
university = {Universidad Politécnica de Madrid},
year = {2016},
type = {Thesis}
}

@article{RN101,
author = {Garita-Cambronero, Jerson and Palacio-Bielsa, Ana and Cubero, Jaime},
title = {Xanthomonas arboricola pv. pruni, causal agent of bacterial spot of stone fruits and almond: its genomic and phenotypic characteristics in the X. arboricola species context},
journal = {Molecular Plant Pathology},
volume = {19},
number = {9},
pages = {2053-2065},
ISSN = {1464-6722},
DOI = {10.1111/mpp.12679},
url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/mpp.12679},
year = {2018},
type = {Journal Article}
}

@article{RN102,
author = {Garita-Cambronero, Jerson and Palacio-Bielsa, Ana and López, María M. and Cubero, Jaime},
title = {Comparative Genomic and Phenotypic Characterization of Pathogenic and Non-Pathogenic Strains of Xanthomonas arboricola Reveals Insights into the Infection Process of Bacterial Spot Disease of Stone Fruits},
journal = {PLOS ONE},
volume = {11},
number = {8},
pages = {e0161977},
DOI = {10.1371/journal.pone.0161977},
url = {https://doi.org/10.1371/journal.pone.0161977},
year = {2016},
type = {Journal Article}
}

@article{RN100,
author = {Garita-Cambronero, Jerson and Sena-Vélez, Marta and Ferragud, Elisa and Sabuquillo, Pilar and Redondo, Cristina and Cubero, Jaime},
title = {Xanthomonas citri subsp. citri and Xanthomonas arboricola pv. pruni: Comparative analysis of two pathogens producing similar symptoms in different host plants},
journal = {PLOS ONE},
volume = {14},
number = {7},
pages = {e0219797},
DOI = {10.1371/journal.pone.0219797},
url = {https://doi.org/10.1371/journal.pone.0219797},
year = {2019},
type = {Journal Article}
}

@article{RN3,
author = {Gürlebeck, Doreen and Jahn, Simone and Gürlebeck, Norman and Szczesny, Robert and Szurek, Boris and Hahn, Simone and Hause, Gerd and Bonas, Ulla},
title = {Visualization of novel virulence activities of the Xanthomonas type III effectors AvrBs1, AvrBs3 and AvrBs4},
journal = {Molecular Plant Pathology},
volume = {10},
number = {2},
pages = {175-188},
ISSN = {1464-6722},
DOI = {10.1111/j.1364-3703.2008.00519.x},
url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/j.1364-3703.2008.00519.x},
year = {2009},
type = {Journal Article}
}

@article{RN35,
author = {Gürlebeck, Doreen and Szurek, Boris and Bonas, Ulla},
title = {Dimerization of the bacterial effector protein AvrBs3 in the plant cell cytoplasm prior to nuclear import},
journal = {The Plant Journal},
volume = {42},
number = {2},
pages = {175-187},
ISSN = {0960-7412},
DOI = {10.1111/j.1365-313X.2005.02370.x},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1365-313X.2005.02370.x},
year = {2005},
type = {Journal Article}
}

@article{RN57,
author = {Guy, Endrick and Genissel, Anne and Hajri, Ahmed and Chabannes, Matthieu and David, Perrine and Carrere, Sébastien and Lautier, Martine and Roux, Brice and Boureau, Tristan and Arlat, Matthieu and Poussier, Stéphane and Noël, Laurent D.},
title = {Natural Genetic Variation of Xanthomonas campestris pv. campestris Pathogenicity on Arabidopsis Revealed by Association and Reverse Genetics},
journal = {mBio},
volume = {4},
number = {3},
pages = {e00538-12},
DOI = {10.1128/mBio.00538-12},
url = {https://mbio.asm.org/content/mbio/4/3/e00538-12.full.pdf},
year = {2013},
type = {Journal Article}
}

@article{RN54,
author = {Guy, Endrick and Lautier, Martine and Chabannes, Matthieu and Roux, Brice and Lauber, Emmanuelle and Arlat, Matthieu and Noël, Laurent D.},
title = {xopAC-triggered Immunity against Xanthomonas Depends on Arabidopsis Receptor-Like Cytoplasmic Kinase Genes PBL2 and RIPK},
journal = {PLOS ONE},
volume = {8},
number = {8},
pages = {e73469},
DOI = {10.1371/journal.pone.0073469},
url = {https://doi.org/10.1371/journal.pone.0073469},
year = {2013},
type = {Journal Article}
}

@article{RN83,
author = {Han, Qian and Zhou, Changhe and Wu, Shuchi and Liu, Yi and Triplett, Lindsay and Miao, Jiamin and Tokuhisa, James and Deblais, Loïc and Robinson, Howard and Leach, Jan E and Li, Jianyong and Zhao, Bingyu},
title = {Crystal Structure of Xanthomonas AvrRxo1-ORF1, a Type III Effector with a Polynucleotide Kinase Domain, and Its Interactor AvrRxo1-ORF2},
journal = {Structure},
volume = {23},
number = {10},
pages = {1900-1909},
ISSN = {0969-2126},
DOI = {https://doi.org/10.1016/j.str.2015.06.030},
url = {http://www.sciencedirect.com/science/article/pii/S0969212615003251},
year = {2015},
type = {Journal Article}
}

@article{RN60,
author = {Harrison, James and Studholme, David J.},
title = {Draft genome sequence of Xanthomonas axonopodis pathovar vasculorum NCPPB 900},
journal = {FEMS Microbiology Letters},
volume = {360},
number = {2},
pages = {113-116},
ISSN = {0378-1097},
DOI = {10.1111/1574-6968.12607},
url = {https://doi.org/10.1111/1574-6968.12607},
year = {2014},
type = {Journal Article}
}

@article{RN33,
author = {Herbers, Karin and Conrads-Strauch, Jutta and Bonas, Ulla},
title = {Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein},
journal = {Nature},
volume = {356},
number = {6365},
pages = {172-174},
ISSN = {1476-4687},
DOI = {10.1038/356172a0},
url = {https://doi.org/10.1038/356172a0},
year = {1992},
type = {Journal Article}
}

@article{RN38,
author = {Heuer, Holger and Yin, Yan-Ni and Xue, Qing-Yun and Smalla, Kornelia and Guo, Jian-Hua},
title = {Repeat Domain Diversity of avrBs3-Like Genes in Ralstonia solanacearum Strains and Association with Host Preferences in the Field},
journal = {Applied and Environmental Microbiology},
volume = {73},
number = {13},
pages = {4379-4384},
DOI = {10.1128/aem.00367-07},
url = {https://aem.asm.org/content/aem/73/13/4379.full.pdf},
year = {2007},
type = {Journal Article}
}

@article{RN37,
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title = {Identification of a Family of Avirulence Genes from Xanthomonas oryzae pv. oryzae},
journal = {Molecular Plant-Microbe Interactions},
volume = {5},
pages = {451-459},
DOI = {10.1094/MPMI-5-451},
year = {1992},
type = {Journal Article}
}

@article{RN104,
author = {Jalan, Neha and Kumar, Dibyendu and Andrade, Maxuel O. and Yu, Fahong and Jones, Jeffrey B. and Graham, James H. and White, Frank F. and Setubal, João C. and Wang, Nian},
title = {Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range},
journal = {BMC Genomics},
volume = {14},
number = {1},
pages = {551},
ISSN = {1471-2164},
DOI = {10.1186/1471-2164-14-551},
url = {https://doi.org/10.1186/1471-2164-14-551},
year = {2013},
type = {Journal Article}
}

@article{RN81,
author = {Ji, Zhi-Yuan and Xiong, Li and Zou, Li-Fang and Li, Yu-Rong and Ma, Wen-Xiu and Liu, Liang and Zakria, Muhammad and Ji, Guang-Hai and Chen, Gong-You},
title = {AvrXa7-Xa7 Mediated Defense in Rice Can Be Suppressed by Transcriptional Activator-Like Effectors TAL6 and TAL11a from Xanthomonas oryzae pv. oryzicola},
journal = {Molecular Plant-Microbe Interactions
Retraction in: Mol Plant Microbe Interact. (2014-Dec) 27(12): 1413},
volume = {27},
number = {9},
pages = {983-995},
DOI = {10.1094/mpmi-09-13-0279-r},
url = {https://apsjournals.apsnet.org/doi/abs/10.1094/MPMI-09-13-0279-R},
year = {2014},
type = {Journal Article}
}

@article{RN90,
author = {Jiang, Wei and Jiang, Bo-Le and Xu, Rong-Qi and Huang, Jun-Ding and Wei, Hong-Yu and Jiang, Guo-Feng and Cen, Wei-Jian and Liu, Jiao and Ge, Ying-Ying and Li, Guang-Hua and Su, Li-Li and Hang, Xiao-Hong and Tang, Dong-Jie and Lu, Guang-Tao and Feng, Jia-Xun and He, Yong-Qiang and Tang, Ji-Liang},
title = {Identification of Six Type III Effector Genes with the PIP Box in Xanthomonas campestris pv. campestris and Five of Them Contribute Individually to Full Pathogenicity},
journal = {Molecular Plant-Microbe Interactions®},
volume = {22},
number = {11},
pages = {1401-1411},
ISSN = {0894-0282},
DOI = {10.1094/MPMI-22-11-1401},
url = {https://doi.org/10.1094/MPMI-22-11-1401},
year = {2009},
type = {Journal Article}
}

@article{RN105,
author = {Jibrin, Mustafa O. and Potnis, Neha and Timilsina, Sujan and Minsavage, Gerald V. and Vallad, Gary E. and Roberts, Pamela D. and Jones, Jeffrey B. and Goss, Erica M.},
title = {Genomic Inference of Recombination-Mediated Evolution in <span class="named-content genus-species" id="named-content-1">Xanthomonas euvesicatoria</span> and <span class="named-content genus-species" id="named-content-2">X. perforans</span>},
journal = {Applied and Environmental Microbiology},
volume = {84},
number = {13},
pages = {e00136-18},
DOI = {10.1128/aem.00136-18},
url = {https://aem.asm.org/content/aem/84/13/e00136-18.full.pdf},
year = {2018},
type = {Journal Article}
}

@article{RN50,
author = {Kay, Sabine and Bonas, Ulla},
title = {How Xanthomonas type III effectors manipulate the host plant},
journal = {Current Opinion in Microbiology},
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number = {1},
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url = {http://www.sciencedirect.com/science/article/pii/S1369527408001914},
year = {2009},
type = {Journal Article}
}

@article{RN30,
author = {Kay, Sabine and Hahn, Simone and Marois, Eric and Hause, Gerd and Bonas, Ulla},
title = {A Bacterial Effector Acts as a Plant Transcription Factor and Induces a Cell Size Regulator},
journal = {Science},
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pages = {648-651},
DOI = {10.1126/science.1144956},
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year = {2007},
type = {Journal Article}
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@article{RN13,
author = {Kearney, Brian and Staskawicz, Brian J.},
title = {Widespread distribution and fitness contribution of Xanthomonas campestris avirulence gene avrBs2},
journal = {Nature},
volume = {346},
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pages = {385-386},
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year = {1990},
type = {Journal Article}
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@article{RN39,
author = {Khan, Madiha and Seto, Derek and Subramaniam, Rajagopal and Desveaux, Darrell},
title = {Oh, the places they'll go! A survey of phytopathogen effectors and their host targets},
journal = {The Plant Journal},
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year = {2018},
type = {Journal Article}
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@article{RN34,
author = {Lee, Amy Huei-Yi and Middleton, Maggie A. and Guttman, David S. and Desveaux, Darrell},
title = {Phytopathogen type III effectors as probes of biological systems},
journal = {Microbial Biotechnology},
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number = {3},
pages = {230-240},
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url = {https://sfamjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1751-7915.12042},
year = {2013},
type = {Journal Article}
}

@article{RN45,
author = {Lewis, Jennifer D. and Lee, Amy and Ma, Wenbo and Zhou, Huanbin and Guttman, David S. and Desveaux, Darrell},
title = {The YopJ superfamily in plant-associated bacteria},
journal = {Molecular Plant Pathology},
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number = {9},
pages = {928-937},
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url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/j.1364-3703.2011.00719.x},
year = {2011},
type = {Journal Article}
}

@article{RN89,
author = {Li, Guangyong and Froehlich, John E. and Elowsky, Christian and Msanne, Joseph and Ostosh, Andrew C. and Zhang, Chi and Awada, Tala and Alfano, James R.},
title = {Distinct Pseudomonas type-III effectors use a cleavable transit peptide to target chloroplasts},
journal = {The Plant Journal},
volume = {77},
number = {2},
pages = {310-321},
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url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/tpj.12396},
year = {2014},
type = {Journal Article}
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@article{RN19,
author = {Li, Shuai and Wang, Yanping and Wang, Shanzhi and Fang, Anfei and Wang, Jiyang and Liu, Lijuan and Zhang, Kang and Mao, Yuling and Sun, Wenxian},
title = {The Type III Effector AvrBs2 in Xanthomonas oryzae pv. oryzicola Suppresses Rice Immunity and Promotes Disease Development},
journal = {Molecular Plant-Microbe Interactions},
volume = {28},
number = {8},
pages = {869-880},
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url = {https://apsjournals.apsnet.org/doi/abs/10.1094/MPMI-10-14-0314-R},
year = {2015},
type = {Journal Article}
}

@article{RN40,
author = {Lin, Yi-Han and Machner, Matthias P.},
title = {Exploitation of the host cell ubiquitin machinery by microbial effector proteins},
journal = {Journal of Cell Science},
volume = {130},
number = {12},
pages = {1985-1996},
DOI = {10.1242/jcs.188482},
url = {https://jcs.biologists.org/content/joces/130/12/1985.full.pdf},
year = {2017},
type = {Journal Article}
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@article{RN82,
author = {Liu, Haifeng and Chang, Qingle and Feng, Wenjie and Zhang, Baogang and Wu, Tao and Li, Ning and Yao, Fangyin and Ding, Xinhua and Chu, Zhaohui},
title = {Domain Dissection of AvrRxo1 for Suppressor, Avirulence and Cytotoxicity Functions},
journal = {PLOS ONE},
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pages = {e113875},
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url = {https://doi.org/10.1371/journal.pone.0113875},
year = {2014},
type = {Journal Article}
}

@article{RN16,
author = {Liu, Yongting and Long, Juying and Shen, Dan and Song, Congfeng},
title = {Xanthomonas oryzae pv. oryzae requires H-NS-family protein XrvC to regulate virulence during rice infection},
journal = {FEMS Microbiology Letters},
volume = {363},
number = {10},
ISSN = {0378-1097},
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url = {https://doi.org/10.1093/femsle/fnw067},
year = {2016},
type = {Journal Article}
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author = {Marois, Eric and Van den Ackerveken, Guido and Bonas, Ulla},
title = {The Xanthomonas Type III Effector Protein AvrBs3 Modulates Plant Gene Expression and Induces Cell Hypertrophy in the Susceptible Host},
journal = {Molecular Plant-Microbe Interactions®},
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number = {7},
pages = {637-646},
DOI = {10.1094/mpmi.2002.15.7.637},
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year = {2002},
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@article{RN18,
author = {Medina, Cesar Augusto and Reyes, Paola Andrea and Trujillo, Cesar Augusto and Gonzalez, Juan Luis and Bejarano, David Alejandro and Montenegro, Nathaly Andrea and Jacobs, Jonathan M. and Joe, Anna and Restrepo, Silvia and Alfano, James R. and Bernal, Adriana},
title = {The role of type III effectors from Xanthomonas axonopodis pv. manihotis in virulence and suppression of plant immunity},
journal = {Molecular Plant Pathology},
volume = {19},
number = {3},
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year = {2018},
type = {Journal Article}
}

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author = {Minsavage, G. V. and Dahlbeck, D. and Whalen, M. C. and Kearney, B. and Bonas, U. and Staskawicz, B. J. and Stall, R. E.},
title = {Gene-For-Gene Relationships Specifying Disease Resistance in Xanthomonas campestris pv. vesicatoria – Pepper Interactions},
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pages = {41-47},
DOI = {10.1094/MPMI-3-041},
year = {1990},
type = {Journal Article}
}

@article{RN69,
author = {Minsavage, G.V . and Jones, J.B. and Stall, R.E. },
title = {Cloning and sequencing of an avirulence gene (avrRxv3) isolated from Xanthomonas campestris pv. vesicatoria tomato race 3},
journal = {Phytopathology},
volume = {86},
pages = {S15},
year = {1996},
type = {Journal Article}
}

@article{RN32,
author = {Moscou, Matthew J. and Bogdanove, Adam J.},
title = {A Simple Cipher Governs DNA Recognition by TAL Effectors},
journal = {Science},
volume = {326},
number = {5959},
pages = {1501-1501},
DOI = {10.1126/science.1178817},
url = {https://science.sciencemag.org/content/sci/326/5959/1501.full.pdf},
year = {2009},
type = {Journal Article}
}

@article{RN106,
author = {Mukaihara, Takafumi and Tamura, Naoyuki and Iwabuchi, Masaki},
title = {Genome-Wide Identification of a Large Repertoire of Ralstonia solanacearum Type III Effector Proteins by a New Functional Screen},
journal = {Molecular Plant-Microbe Interactions®},
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pages = {251-262},
DOI = {10.1094/mpmi-23-3-0251},
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year = {2010},
type = {Journal Article}
}

@article{RN96,
author = {Nakano, Masahito and Mukaihara, Takafumi},
title = {Ralstonia solanacearum Type III Effector RipAL Targets Chloroplasts and Induces Jasmonic Acid Production to Suppress Salicylic Acid-Mediated Defense Responses in Plants},
journal = {Plant and Cell Physiology},
volume = {59},
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pages = {2576-2589},
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url = {https://doi.org/10.1093/pcp/pcy177},
year = {2018},
type = {Journal Article}
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@article{RN4,
author = {Napoli, C and Staskawicz, B},
title = {Molecular characterization and nucleic acid sequence of an avirulence gene from race 6 of Pseudomonas syringae pv. glycinea},
journal = {Journal of Bacteriology},
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DOI = {10.1128/jb.169.2.572-578.1987},
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year = {1987},
type = {Journal Article}
}

@article{RN93,
author = {Nissinen, Riita M. and Ytterberg, A. Jimmy and Bogdanove, Adam J. and Van Wijk, Klass J. and Beer, Steven V.},
title = {Analyses of the secretomes of Erwinia amylovora and selected hrp mutants reveal novel type III secreted proteins and an effect of HrpJ on extracellular harpin levels},
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url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/j.1364-3703.2006.00370.x},
year = {2007},
type = {Journal Article}
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@article{RN66,
author = {Noël, Laurent and Thieme, Frank and Nennstiel, Dirk and Bonas, Ulla},
title = {Two Novel Type III-Secreted Proteins of Xanthomonas campestris pv. vesicatoria Are Encoded within the hrp Pathogenicity Island},
journal = {Journal of Bacteriology},
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year = {2002},
type = {Journal Article}
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@phdthesis{RN5,
author = {Nyembe, Nompumelelo Philile Praiseworth},
title = {Development of a reporter system for the analysis of Xylophilus ampelinus type III secreted effectors},
university = {University of the Western Cape},
DOI = {http://hdl.handle.net/11394/4325},
year = {2014},
type = {Thesis}
}

@article{RN20,
author = {Park, Sang Ryeol and Moon, Seok Jun and Shin, Dongjin and Kim, Min Gab and Hwang, Duk-Ju and Bae, Shin-Chul and Kim, Jeong-Gu and Yi, Bu Young and Byun, Myung Ok},
title = {Isolation and Characterization of Rice OsHRL Gene Related to Bacterial Blight Resistance },
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url = {http://doi.org/10.5423/PPJ.2010.26.4.417},
year = {2010},
type = {Journal Article}
}

@article{RN64,
author = {Peeters, Nemo and Carrère, Sébastien and Anisimova, Maria and Plener, Laure and Cazalé, Anne-Claire and Genin, Stephane},
title = {Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex},
journal = {BMC Genomics},
volume = {14},
number = {1},
pages = {859},
ISSN = {1471-2164},
DOI = {10.1186/1471-2164-14-859},
url = {https://doi.org/10.1186/1471-2164-14-859},
year = {2013},
type = {Journal Article}
}

@article{RN43,
author = {Pfeilmeier, Sebastian and Caly, Delphine L. and Malone, Jacob G.},
title = {Bacterial pathogenesis of plants: future challenges from a microbial perspective},
journal = {Molecular Plant Pathology},
volume = {17},
number = {8},
pages = {1298-1313},
ISSN = {1464-6722},
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url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/mpp.12427},
year = {2016},
type = {Journal Article}
}

@article{RN67,
author = {Popov, Georgy and Fraiture, Malou and Brunner, Frederic and Sessa, Guido},
title = {Multiple Xanthomonas euvesicatoria Type III Effectors Inhibit flg22-Triggered Immunity},
journal = {Molecular Plant-Microbe Interactions},
volume = {29},
number = {8},
pages = {651-660},
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url = {https://apsjournals.apsnet.org/doi/abs/10.1094/MPMI-07-16-0137-R},
year = {2016},
type = {Journal Article}
}

@article{RN65,
author = {Popov, Georgy and Majhi, Bharat Bhusan and Sessa, Guido},
title = {Effector Gene xopAE of Xanthomonas euvesicatoria 85-10 Is Part of an Operon and Encodes an E3 Ubiquitin Ligase},
journal = {Journal of Bacteriology},
volume = {200},
number = {16},
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url = {https://jb.asm.org/content/jb/200/16/e00104-18.full.pdf},
year = {2018},
type = {Journal Article}
}

@article{RN103,
author = {Potnis, Neha and Krasileva, Ksenia and Chow, Virginia and Almeida, Nalvo F. and Patil, Prabhu B. and Ryan, Robert P. and Sharlach, Molly and Behlau, Franklin and Dow, J. Max and Momol, M. T. and White, Frank F. and Preston, James F. and Vinatzer, Boris A. and Koebnik, Ralf and Setubal, João C. and Norman, David J. and Staskawicz, Brian J. and Jones, Jeffrey B.},
title = {Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper},
journal = {BMC Genomics},
volume = {12},
number = {1},
pages = {146},
ISSN = {1471-2164},
DOI = {10.1186/1471-2164-12-146},
url = {https://doi.org/10.1186/1471-2164-12-146},
year = {2011},
type = {Journal Article}
}

@article{RN72,
author = {Qian, Wei and Jia, Yantao and Ren, Shuang-Xi and He, Yong-Qiang and Feng, Jia-Xun and Lu, Ling-Feng and Sun, Qihong and Ying, Ge and Tang, Dong-Jie and Tang, Hua and Wu, Wei and Hao, Pei and Wang, Lifeng and Jiang, Bo-Le and Zeng, Shenyan and Gu, Wen-Yi and Lu, Gang and Rong, Li and Tian, Yingchuan and Yao, Zhijian and Fu, Gang and Chen, Baoshan and Fang, Rongxiang and Qiang, Boqin and Chen, Zhu and Zhao, Guo-Ping and Tang, Ji-Liang and He, Chaozu},
title = {Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris},
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url = {http://genome.cshlp.org/content/15/6/757.abstract},
year = {2005},
type = {Journal Article}
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title = {A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection},
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url = {https://www.pnas.org/content/pnas/101/47/16624.full.pdf},
year = {2004},
type = {Journal Article}
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author = {Ronald, Pamela C. and Staskawicz, Brian J.},
title = {The avirulence gene avrBs1 from Xanthomonas campestris pv. vesicatoria encodes a 50-kD protein},
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type = {Journal Article}
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@article{RN7,
author = {Rongqi, Xu and Xianzhen, Li and Hongyu, Wei and Bole, Jiang and Kai, Li and Yongqiang, He and Jiaxuan, Feng and Jiliang, Tang},
title = {Regulation of eight avr by hrpG and hrpX in Xanthomonas campestris pv. campestris and their role in pathogenicity},
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url = {https://www.tandfonline.com/doi/abs/10.1080/10020070612330143},
year = {2006},
type = {Journal Article}
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@article{RN28,
author = {Rossier, Ombeline and Wengelnik, Kai and Hahn, Karoline and Bonas, Ulla},
title = {The Xanthomonas Hrp type III system secretes proteins from plant and mammalian bacterial pathogens},
journal = {Proceedings of the National Academy of Sciences},
volume = {96},
number = {16},
pages = {9368-9373},
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year = {1999},
type = {Journal Article}
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@article{RN91,
author = {Roux, Brice and Bolot, Stéphanie and Guy, Endrick and Denancé, Nicolas and Lautier, Martine and Jardinaud, Marie-Françoise and Fischer-Le Saux, Marion and Portier, Perrine and Jacques, Marie-Agnès and Gagnevin, Lionel and Pruvost, Olivier and Lauber, Emmanuelle and Arlat, Matthieu and Carrère, Sébastien and Koebnik, Ralf and Noël, Laurent D.},
title = {Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome},
journal = {BMC Genomics},
volume = {16},
number = {1},
pages = {975},
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DOI = {10.1186/s12864-015-2190-0},
url = {https://doi.org/10.1186/s12864-015-2190-0},
year = {2015},
type = {Journal Article}
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@article{RN78,
author = {Salomon, Dor and Dar, Daniel and Sreeramulu, Shivakumar and Sessa, Guido},
title = {Expression of Xanthomonas campestris pv. vesicatoria Type III Effectors in Yeast Affects Cell Growth and Viability},
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volume = {24},
number = {3},
pages = {305-314},
DOI = {10.1094/mpmi-09-10-0196},
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year = {2011},
type = {Journal Article}
}

@article{RN47,
author = {Scholze, Heidi and Boch, Jens},
title = {TAL effectors are remote controls for gene activation},
journal = {Current Opinion in Microbiology},
volume = {14},
number = {1},
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DOI = {https://doi.org/10.1016/j.mib.2010.12.001},
url = {http://www.sciencedirect.com/science/article/pii/S1369527410001888},
year = {2011},
type = {Journal Article}
}

@article{RN85,
author = {Schuebel, Felix and Rocker, Andrea and Edelmann, Daniel and Schessner, Julia and Brieke, Clara and Meinhart, Anton},
title = {3′-NADP and 3′-NAADP, Two Metabolites Formed by the Bacterial Type III Effector AvrRxo1},
journal = {Journal of Biological Chemistry},
volume = {291},
number = {44},
pages = {22868-22880},
DOI = {10.1074/jbc.M116.751297},
url = {http://www.jbc.org/content/291/44/22868.abstract},
year = {2016},
type = {Journal Article}
}

@article{RN98,
author = {Schwartz, Allison R. and Potnis, Neha and Timilsina, Sujan and Wilson, Mark and Patané, José and Martins, Joaquim and Minsavage, Gerald V. and Dahlbeck, Douglas and Akhunova, Alina and Almeida, Nalvo and Vallad, Gary E. and Barak, Jeri D. and White, Frank F. and Miller, Sally A. and Ritchie, David and Goss, Erica and Bart, Rebecca S. and Setubal, João C. and Jones, Jeffrey B. and Staskawicz, Brian J.},
title = {Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity},
journal = {Frontiers in Microbiology},
volume = {6},
number = {535},
ISSN = {1664-302X},
DOI = {10.3389/fmicb.2015.00535},
url = {https://www.frontiersin.org/article/10.3389/fmicb.2015.00535},
year = {2015},
type = {Journal Article}
}

@article{RN86,
author = {Shidore, Teja and Broeckling, Corey D. and Kirkwood, Jay S. and Long, John J. and Miao, Jiamin and Zhao, Bingyu and Leach, Jan E. and Triplett, Lindsay R.},
title = {The effector AvrRxo1 phosphorylates NAD in planta},
journal = {PLOS Pathogens},
volume = {13},
number = {6},
pages = {e1006442},
DOI = {10.1371/journal.ppat.1006442},
url = {https://doi.org/10.1371/journal.ppat.1006442},
year = {2017},
type = {Journal Article}
}

@article{RN8,
author = {Stall, Robert E. and Loschke, David C. and Jones, Jeffrey B},
title = {Linkage of copper resistance and avirulence loci on a self-transmissible plasmid in Xanthomonas campestris pv. vesicatoria},
journal = {Molecular Plant Pathology },
volume = {76},
pages = {240-243},
DOI = {10.1094/Phyto-76-240},
year = {1986},
type = {Journal Article}
}

@article{RN23,
author = {Stella, Stefano and Molina, Rafael and Yefimenko, Igor and Prieto, Jesus and Silva, George and Bertonati, Claudia and Juillerat, Alexandre and Duchateau, Phillippe and Montoya, Guillermo},
title = {Structure of the AvrBs3-DNA complex provides new insights into the initial thymine-recognition mechanism},
journal = {Acta Crystallographica},
volume = {69},
number = {9},
pages = {1707-1716},
ISSN = {0907-4449},
DOI = {10.1107/S0907444913016429},
url = {https://doi.org/10.1107/S0907444913016429},
year = {2013},
type = {Journal Article}
}

@article{RN62,
author = {Studholme, David J. and Kemen, Eric and MacLean, Daniel and Schornack, Sebastian and Aritua, Valente and Thwaites, Richard and Grant, Murray and Smith, Julian and Jones, Jonathan D.G.},
title = {Genome-wide sequencing data reveals virulence factors implicated in banana Xanthomonas wilt},
journal = {FEMS Microbiology Letters},
volume = {310},
number = {2},
pages = {182-192},
ISSN = {0378-1097},
DOI = {10.1111/j.1574-6968.2010.02065.x},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1574-6968.2010.02065.x},
year = {2010},
type = {Journal Article}
}

@article{RN9,
author = {Swanson, J. and Kearney, B. and Dahlbeck, D. and Staskawicz, B.},
title = {Cloned avirulence gene of Xanthomonas campestris pv. vesicatoria complements spontaneous race-change mutants},
journal = {Molecular Plant-Microbe Interactions},
volume = {1},
number = {1},
pages = {5-9},
ISSN = {0894-0282},
DOI = {10.1094/MPMI-1-005},
year = {1988},
type = {Journal Article}
}

@article{RN10,
author = {Szczesny, Robert and Büttner, Daniela and Escolar, Lucia and Schulze, Sebastian and Seiferth, Anja and Bonas, Ulla},
title = {Suppression of the AvrBs1-specific hypersensitive response by the YopJ effector homolog AvrBsT from Xanthomonas depends on a SNF1-related kinase},
journal = {New Phytologist},
volume = {187},
number = {4},
pages = {1058-1074},
ISSN = {0028-646X},
DOI = {10.1111/j.1469-8137.2010.03346.x},
url = {https://nph.onlinelibrary.wiley.com/doi/abs/10.1111/j.1469-8137.2010.03346.x},
year = {2010},
type = {Journal Article}
}

@article{RN29,
author = {Szurek, Boris and Rossier, Ombeline and Hause, Gerd and Bonas, Ulla},
title = {Type III-dependent translocation of the Xanthomonas AvrBs3 protein into the plant cell},
journal = {Molecular Microbiology},
volume = {46},
number = {1},
pages = {13-23},
ISSN = {0950-382X},
DOI = {10.1046/j.1365-2958.2002.03139.x},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1046/j.1365-2958.2002.03139.x},
year = {2002},
type = {Journal Article}
}

@article{RN87,
author = {Teper, Doron and Burstein, David and Salomon, Dor and Gershovitz, Michael and Pupko, Tal and Sessa, Guido},
ref-author = {Teper et al.},
title = {Identification of novel Xanthomonas euvesicatoria type III effector proteins by a machine-learning approach},
journal = {Molecular Plant Pathology},
volume = {17},
number = {3},
pages = {398-411},
ISSN = {1464-6722},
DOI = {10.1111/mpp.12288},
url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/mpp.12288},
year = {2016},
type = {Journal Article}
}

@article{teper2018xanthomonas,
  title={The Xanthomonas euvesicatoria type III effector XopAU is an active protein kinase that manipulates plant MAP kinase signaling},
  author={Teper, Doron and Girija, Anil Madhusoodana and Bosis, Eran and Popov, Georgy and Savidor, Alon and Sessa, Guido},
  ref-author={Teper et al. 2018},
  journal={PLoS pathogens},
  volume={14},
  number={1},
  pages={e1006880},
  year={2018},
  publisher={Public Library of Science}
}

@article{RN11,
author = {Teper, Doron and Sunitha, Sukumaran and Martin, Gregory B. and Sessa, Guido},
title = {Five Xanthomonas type III effectors suppress cell death induced by components of immunity-associated MAP kinase cascades},
journal = {Plant Signaling & Behavior},
volume = {10},
number = {10},
pages = {e1064573},
ISSN = {null},
DOI = {10.1080/15592324.2015.1064573},
url = {https://doi.org/10.1080/15592324.2015.1064573},
year = {2015},
type = {Journal Article}
}

@article{RN12,
author = {Thieme, Frank and Koebnik, Ralf and Bekel, Thomas and Berger, Carolin and Boch, Jens and Büttner, Daniela and Caldana, Camila and Gaigalat, Lars and Goesmann, Alexander and Kay, Sabine and Kirchner, Oliver and Lanz, Christa and Linke, Burkhard and McHardy, Alice C. and Meyer, Folker and Mittenhuber, Gerhard and Nies, Dietrich H. and Niesbach-Klösgen, Ulla and Patschkowski, Thomas and Rückert, Christian and Rupp, Oliver and Schneiker, Susanne and Schuster, Stephan C. and Vorhölter, Frank-Jörg and Weber, Ernst and Pühler, Alfred and Bonas, Ulla and Bartels, Daniela and Kaiser, Olaf},
title = {Insights into Genome Plasticity and Pathogenicity of the Plant Pathogenic Bacterium Xanthomonas campestris pv. vesicatoria Revealed by the Complete Genome Sequence},
journal = {Journal of Bacteriology},
volume = {187},
number = {21},
pages = {7254-7266},
DOI = {10.1128/jb.187.21.7254-7266.2005},
url = {https://jb.asm.org/content/jb/187/21/7254.full.pdf},
year = {2005},
type = {Journal Article}
}

@article{RN84,
author = {Triplett, Lindsay R. and Shidore, Teja and Long, John and Miao, Jiamin and Wu, Shuchi and Han, Qian and Zhou, Changhe and Ishihara, Hiromichi and Li, Jianyong and Zhao, Bingyu and Leach, Jan E.},
title = {AvrRxo1 Is a Bifunctional Type III Secreted Effector and Toxin-Antitoxin System Component with Homologs in Diverse Environmental Contexts},
journal = {PLOS ONE},
volume = {11},
number = {7},
pages = {e0158856},
DOI = {10.1371/journal.pone.0158856},
url = {https://doi.org/10.1371/journal.pone.0158856},
year = {2016},
type = {Journal Article}
}

@article{RN26,
author = {Van den Ackerveken, Guido and Marois, Eric and Bonas, Ulla},
title = {Recognition of the Bacterial Avirulence Protein AvrBs3 Occurs inside the Host Plant Cell},
journal = {Cell},
volume = {87},
number = {7},
pages = {1307-1316},
ISSN = {0092-8674},
DOI = {10.1016/S0092-8674(00)81825-5},
url = {http://www.sciencedirect.com/science/article/pii/S0092867400818255},
year = {1996},
type = {Journal Article}
}

@article{RN63,
author = {Vicente, Joana G. and Rothwell, Steve and Holub, Eric B. and Studholme, David J.},
title = {Pathogenic, phenotypic and molecular characterisation of Xanthomonas nasturtii sp. nov. and Xanthomonas floridensis sp. nov., new species of Xanthomonas associated with watercress production in Florida},
journal = {International Journal of Systematic and Evolutionary Microbiology},
volume = {67},
number = {9},
pages = {3645-3654},
ISSN = {1466-5026},
DOI = {https://doi.org/10.1099/ijsem.0.002189},
url = {https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.002189},
year = {2017},
type = {Journal Article}
}

@article{RN95,
author = {Vorhölter, Frank-Jörg and Schneiker, Susanne and Goesmann, Alexander and Krause, Lutz and Bekel, Thomas and Kaiser, Olaf and Linke, Burkhard and Patschkowski, Thomas and Rückert, Christian and Schmid, Joachim and Sidhu, Vishaldeep Kaur and Sieber, Volker and Tauch, Andreas and Watt, Steven Alexander and Weisshaar, Bernd and Becker, Anke and Niehaus, Karsten and Pühler, Alfred},
title = {The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis},
journal = {Journal of Biotechnology},
volume = {134},
number = {1},
pages = {33-45},
ISSN = {0168-1656},
DOI = {https://doi.org/10.1016/j.jbiotec.2007.12.013},
url = {http://www.sciencedirect.com/science/article/pii/S0168165608000072},
year = {2008},
type = {Journal Article}
}

@article{RN56,
author = {Wang, Guoxun and Roux, Brice and Feng, Feng and Guy, Endrick and Li, Lin and Li, Nannan and Zhang, Xiaojuan and Lautier, Martine and Jardinaud, Marie-Françoise and Chabannes, Matthieu and Arlat, Matthieu and Chen, She and He, Chaozu and Noël, Laurent D and Zhou, Jian-Min},
title = {The Decoy Substrate of a Pathogen Effector and a Pseudokinase Specify Pathogen-Induced Modified-Self Recognition and Immunity in Plants},
journal = {Cell Host & Microbe},
volume = {18},
number = {3},
pages = {285-295},
ISSN = {1931-3128},
DOI = {https://doi.org/10.1016/j.chom.2015.08.004},
url = {http://www.sciencedirect.com/science/article/pii/S1931312815003327},
year = {2015},
type = {Journal Article}
}

@article{RN73,
author = {Wang, Lifeng and Tang, Xiaoyan and He, Chaozu},
title = {The bifunctional effector AvrXccC of Xanthomonas campestris pv. campestris requires plasma membrane-anchoring for host recognition},
journal = {Molecular Plant Pathology},
volume = {8},
number = {4},
pages = {491-501},
ISSN = {1464-6722},
DOI = {10.1111/j.1364-3703.2007.00409.x},
url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/j.1364-3703.2007.00409.x},
year = {2007},
type = {Journal Article}
}

@article{RN71,
author = {Washington, Erica J. and Mukhtar, M. Shahid and Finkel, Omri M. and Wan, Li and Banfield, Mark J. and Kieber, Joseph J. and Dangl, Jeffery L.},
title = {Pseudomonas syringae type III effector HopAF1 suppresses plant immunity by targeting methionine recycling to block ethylene induction},
journal = {Proceedings of the National Academy of Sciences},
volume = {113},
number = {25},
pages = {E3577-E3586},
DOI = {10.1073/pnas.1606322113},
url = {https://www.pnas.org/content/pnas/113/25/E3577.full.pdf},
year = {2016},
type = {Journal Article}
}

@article{RN61,
author = {Wasukira, Arthur and Tayebwa, Johnbosco and Thwaites, Richard and Paszkiewicz, Konrad and Aritua, Valente and Kubiriba, Jerome and Smith, Julian and Grant, Murray and Studholme, David J.},
title = {Genome-Wide Sequencing Reveals Two Major Sub-Lineages in the Genetically Monomorphic Pathogen Xanthomonas Campestris Pathovar Musacearum},
journal = {Genes},
volume = {3},
number = {3},
pages = {361-377},
ISSN = {2073-4425},
url = {https://www.mdpi.com/2073-4425/3/3/361},
year = {2012},
type = {Journal Article}
}

@article{RN15,
author = {Wei, Chudan and Ding, Tian and Chang, Changqing and Yu, Chengpeng and Li, Xingwei and Liu, Qiongguang},
title = {Global Regulator PhoP is Necessary for Motility, Biofilm Formation, Exoenzyme Production, and Virulence of Xanthomonas citri Subsp. citri on Citrus Plants},
journal = {Genes},
volume = {10},
number = {5},
pages = {340},
ISSN = {2073-4425},
DOI = {10.3390/genes10050340},
url = {https://www.mdpi.com/2073-4425/10/5/340},
year = {2019},
type = {Journal Article}
}

@article{RN51,
author = {White, Frank F. and Potnis, Neha and Jones, Jeffrey B. and Koebnik, Ralf},
title = {The type III effectors of Xanthomonas},
journal = {Molecular Plant Pathology},
volume = {10},
number = {6},
pages = {749-766},
ISSN = {1464-6722},
DOI = {10.1111/j.1364-3703.2009.00590.x},
url = {https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/j.1364-3703.2009.00590.x},
year = {2009},
type = {Journal Article}
}

@article{RN79,
author = {Wonni, I. and Cottyn, B. and Detemmerman, L. and Dao, S. and Ouedraogo, L. and Sarra, S. and Tekete, C. and Poussier, S. and Corral, R. and Triplett, L. and Koita, O. and Koebnik, R. and Leach, J. and Szurek, B. and Maes, M. and Verdier, V.},
title = {Analysis of Xanthomonas oryzae pv. oryzicola Population in Mali and Burkina Faso Reveals a High Level of Genetic and Pathogenic Diversity},
journal = {Phytopathology},
volume = {104},
number = {5},
pages = {520-531},
DOI = {10.1094/phyto-07-13-0213-r},
url = {https://apsjournals.apsnet.org/doi/abs/10.1094/PHYTO-07-13-0213-R},
year = {2014},
type = {Journal Article}
}

@article{RN77,
author = {Xie, Xue-Wen and Yu, Jing and Xu, Jian-Long and Zhou, Yong-Li and Li, Zhi-Kang},
title = {Introduction of A Nonhost Gene Rxo1 Cloned from Maize Resistant to Rice Bacterial Leaf Streak into Rice Varieties},
journal = {Chinese Journal of Biotechnology},
volume = {23},
number = {4},
pages = {607-611},
ISSN = {1872-2075},
DOI = {https://doi.org/10.1016/S1872-2075(07)60039-9},
url = {http://www.sciencedirect.com/science/article/pii/S1872207507600399},
year = {2007},
type = {Journal Article}
}

@article{RN52,
author = {Xu, Rong-Qi and Blanvillain, Servane and Feng, Jia-Xun and Jiang, Bo-Le and Li, Xian-Zhen and Wei, Hong-Yu and Kroj, Thomas and Lauber, Emmanuelle and Roby, Dominique and Chen, Baoshan and He, Yong-Qiang and Lu, Guang-Tao and Tang, Dong-Jie and Vasse, Jacques and Arlat, Matthieu and Tang, Ji-Liang},
title = {AvrACXcc8004, a Type III Effector with a Leucine-Rich Repeat Domain from Xanthomonas campestris Pathovar campestris Confers Avirulence in Vascular Tissues of Arabidopsis thaliana Ecotype Col-0},
journal = {Journal of Bacteriology},
volume = {190},
number = {1},
pages = {343-355},
DOI = {10.1128/jb.00978-07},
url = {https://jb.asm.org/content/jb/190/1/343.full.pdf},
year = {2008},
type = {Journal Article}
}

@article{RN75,
author = {Zhao, Bingyu and Ardales, Edna Y. and Raymundo, Asuncion and Bai, Jianfa and Trick, Harold N. and Leach, Jan E. and Hulbert, Scot H.},
title = {The avrRxo1 Gene from the Rice Pathogen Xanthomonas oryzae pv. oryzicola Confers a Nonhost Defense Reaction on Maize with Resistance Gene Rxo1},
journal = {Molecular Plant-Microbe Interactions},
volume = {17},
number = {7},
pages = {771-779},
DOI = {10.1094/mpmi.2004.17.7.771},
url = {https://apsjournals.apsnet.org/doi/abs/10.1094/MPMI.2004.17.7.771},
year = {2004},
type = {Journal Article}
}

@article{RN17,
author = {Zhao, Bingyu and Dahlbeck, Douglas and Krasileva, Ksenia V. and Fong, Richard W. and Staskawicz, Brian J.},
title = {Computational and Biochemical Analysis of the Xanthomonas Effector AvrBs2 and Its Role in the Modulation of Xanthomonas Type Three Effector Delivery},
journal = {PLoS Pathogens},
volume = {7},
number = {12},
pages = {e1002408},
DOI = {10.1371/journal.ppat.1002408},
url = {https://doi.org/10.1371/journal.ppat.1002408},
year = {2011},
type = {Journal Article}
}

@article{RN76,
author = {Zhao, Bingyu and Lin, Xinghua and Poland, Jesse and Trick, Harold and Leach, Jan and Hulbert, Scot},
title = {A maize resistance gene functions against bacterial streak disease in rice},
journal = {Proceedings of the National Academy of Sciences},
volume = {102},
number = {43},
pages = {15383-15388},
DOI = {10.1073/pnas.0503023102},
url = {https://www.pnas.org/content/pnas/102/43/15383.full.pdf},
year = {2005},
type = {Journal Article}
}


</code>

====== Plant resistance genes publications ======

<code bibtex>
@Comment{refnotes,
  namespace = ":euroxanth"
}


</code>

avrbs1

  - Dahlbeck, D., and Stall, R. E. 1979. Mutations for change of race in cultures of //Xanthomonas vesicatoria.//  Phytopathology 69:634-636.
  - Escolar L, Van Den Ackerveken G, Pieplow S, Rossier O, Bonas U. (2001). Type III secretion and in planta recognition of the Xanthomonas avirulence proteins AvrBs1 and AvrBsT. Mol Plant Pathol. 2001 Sep 1;2(5):287-96. doi: 10.1046/j.1464-6722.2001.00077.x.
  - Gurlebeck D, Jahn S, Gurlebeck N, Szczesny R, Szurek B, Hahn S, Hause G, Bonas U. (2009). Visualization of novel virulence activities of the Xanthomonas type III effectors AvrBs1, AvrBs3 and AvrBs4. //Mol. Plant Pathol.//  10, 175–188. doi: 10.1111/j.1364-3703.2008.00519.x
  - Napoli C, Staskawicz. (1987). Molecular characterization of an avirulence gene from race 6 of //Pseudomonas syringae//  pv. //glycinea//. J. Bacteriol. 169:572-578.
  - Nyembe NPP. (2014). Development of a reporter system for the analysis of xylophilus ampelinus type III secreted effectors. University of the Western Cape, Thesis. 108 pages
  - Ronald PC, Staskawicz BJ. (1988). The avirulence gene avrBs1 from Xanthomonas campestris pv. vesicatoria encodes a 50-kD protein. Mol Plant Microbe Interact. 1(5):191-198.
  - Rongqi XU, Xianzhen LI, Hongyu WEI, Bole JIANG, Kai LI, Yongqiang HE, Jiaxun FENG, Jiliang TANG. (2006). Regulation of eight //avr//  genes by hrpG and hrpX in //Xanthomonas campestris//  pv //.campestris//  and their role in pathogenicity. Progress In Natural Science 16(12):1288-1294.
  - Stall RE, Loschke DC, Jones JB. (1986). Linkage of copper resistance and avirulence loci on a self-transmissible plasmid in //Xanthomonas campestris//  pv. //vesicatoria//. Phytopathology 76:240-243.
  - Swanson J, Kearney B, Dahlbeck D, Staskawicz B. (1988). Cloned avirulence gene of //Xanthomonas campestris//  pv. //vesicatoria//  complements spontaneous race-change mutants. Molecular Plant-Micr Interact 1(1):5-9.
  - Szczesny R, Büttner D, Escolar L, Schulze S, Seiferth A, Bonas U. (2010). Suppression of the AvrBs1-specific hypersensitive response by the YopJ effector homolog AvrBsT from Xanthomonas depends on a SNF1-related kinase. New Phytol. 2010;187(4):1058-74. doi: 10.1111/j.1469-8137.2010.03346.x.
  - Teper D, Sunitha S, Martin GB, Sessa G. (2015). Five Xanthomonas type III effectors suppress cell death induced by components of immunity associated MAP kinase cascades. Plant Signaling & Behavior, 10:10, e1064573, DOI: 10.1080/15592324.2015.1064573
  - Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klosgen U, Patschkowski T, Ruckert C, Rupp O, Schneiker S, Schuster SC, Vorholter FJ, Weber E, Puhler A, Bonas U, Bartels D, Kaiser O. (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. J. Bacteriol. 187(21):7254-7266
  - Kearney B, Staskawicz BJ (1990). Widespread distribution and fitness contribution of //Xanthomonas campestris//  avirulence gene //avrBs2//. //Nature//, //346//  (6282), 385. doi: [[https://doi.org/10.1038/346385a0|10.1038/346385a0]]

avrbs2

  - Casper-Lindley C. Dahlbeck D, Clark ET, Staskawicz BJ (2002). Direct biochemical evidence for type III secretion-dependent translocation of the AvrBs2 effector protein into plant cells. //Proceedings of the National Academy of Sciences//, //99//  (12), 8336-8341. doi: [[https://doi.org/10.1073/pnas.122220299|10.1073/pnas.122220299]]
  - Wei C, Ding T, Chang C, Yu C, Li X, Liu Q (2019). Global Regulator PhoP is Necessary for Motility, Biofilm Formation, Exoenzyme Production and Virulence of //Xanthomonas citri//  subsp. //citri//  on Citrus Plants. //Genes//, //10//  (5), 340. doi: [[https://doi.org/10.3390/genes10050340|10.3390/genes10050340]]
  - Liu Y, Long J, Shen D, Song C (2016). //Xanthomonas oryzae//  pv. //oryzae//  requires H-NS-family protein XrvC to regulate virulence during rice infection. //FEMS microbiology letters//, //363//  (10), fnw067. doi: [[https://doi.org/10.1093/femsle/fnw067|10.1093/femsle/fnw067]]
  - Zhao B, Dahlbeck D, Krasileva KV, Fong RW, Staskawicz BJ (2011). Computational and biochemical analysis of the //Xanthomonas//  effector AvrBs2 and its role in the modulation of //Xanthomonas//  type three effector delivery. //PLoS pathogens//, //7//  (12), e1002408. doi: [[https://doi.org/10.1371/journal.ppat.1002408|10.1371/journal.ppat.1002408]]
  - Medina CA, Reyes PA, Trujillo CA, Gonzalez JL, Bejarano DA, Montenegro NA, Jacobs JM, Joe A, Restrepo S, Alfano JR, Bernal A (2018). The role of type III effectors from //Xanthomonas axonopodis//  pv. //manihotis//  in virulence and suppression of plant immunity. //Molecular plant pathology//, //19//  (3), 593-606. doi: [[https://doi.org/10.1111/mpp.12545|10.1111/mpp.12545]]
  - Li S, Wang Y, Wang S, Fang A, Wang J, Liu L, Zhang K, Mao Y, Sun W (2015). The type III effector AvrBs2 in //Xanthomonas oryzae//  pv. //oryzicola//  suppresses rice immunity and promotes disease development. //Molecular Plant-Microbe Interactions//, //28//  (8), 869-880. doi: [[https://doi.org/10.1094/MPMI-10-14-0314-R|10.1094/MPMI-10-14-0314-R]]
  - Park SR, Moon SJ, Shin DJ, Kim MG, Hwang DJ, Bae SC, Kim JG , Yi BY, Byun MO (2010). Isolation and characterization of rice //OsHRL//  gene related to bacterial blight resistance. //The Plant Pathology Journal//, //26//  (4), 417-420. doi: 10.5423/PPJ.2010.26.4.417
  - Coplin DL (1989). Plasmids and their role in the evolution of plant pathogenic bacteria. //Annual review of phytopathology//, //27//  (1), 187-212. doi: [[https://doi.org/10.1146/annurev.py.27.090189.001155|10.1146/annurev.py.27.090189.001155]]
  - Minsavage GV, Dahlbeck D, Whalen MC, Kearney B, Bonas U, Staskawicz BJ, Stall RE (1990). Gene-for-gene relationships specifying disease resistance in //Xanthomonas campestris//  pv. //vesicatoria//-pepper interactions. //Molecular Plant-Microbe Interactions//, //3//  (1), 41-47. doi: 10.1094/MPMI-3-041

avrbs3

  - Stella, S., Molina, R., Yefimenko, I., Prieto, J., Silva, G., Bertonati, C., … & Montoya, G. (2013). Structure of the AvrBs3–DNA complex provides new insights into the initial thymine-recognition mechanism. Acta Crystallographica Section D: Biological Crystallography, 69(9), 1707-1716. DOI: 10.1107/S0907444913016429
  - Minsavage, G. V., Dahlbeck, D., Whalen, M. C., Kearney, B., Bonas, U., Staskawicz, B. J., & Stall, R. E. (1990). Gene-for-gene relationships specifying disease resistance in //Xanthomonas////campestris//  pv. //vesicatoria//-pepper interactions. Molecular Plant-Microbe Interactions, 3(1), 41-47. DOI: [[http://dx.doi.org/10.1094/MPMI-3-041|10.1094/MPMI-3-041]]
  - Bonas, U., Stall, R. E., & Staskawicz, B. (1989). Genetic and structural characterization of the avirulence gene //avrBs3//  from //Xanthomonas campestris//  pv. //vesicatoria//. Molecular and General Genetics MGG, 218(1), 127-136. https:<nowiki>//</nowiki>doi.org/10.1007/BF00330575
  - Bonas, U., Schulte, R., Fenselau, S., Minsavage, G. V., Staskawicz, B. J., & Stall, R. E. (1991). Isolation of a gene cluster from //Xanthomonas////campestris//  pv. //vesicatoria//  that determines pathogenicity and the hypersensitive response on pepper and tomato. Mol. Plant-Microbe Interact, 4(1), 81-88. DOI: 10.1094/MPMI-4-081
  - Van den Ackerveken, G., Marois, E., & Bonas, U. (1996). Recognition of the bacterial avirulence protein AvrBs3 occurs inside the host plant cell. Cell, 87(7), 1307-1316. [[https://doi.org/10.1016/S0092-8674|https://doi.org/10.1016/S0092-8674]](00)81825-5
  - Bonas, U., & Van den Ackerveken, G. (1999). Gene-for-gene interactions: bacterial avirulence proteins specify plant disease resistance. Current opinion in microbiology, 2(1), 94-98. [[https://doi.org/10.1016/S1369-5274|https://doi.org/10.1016/S1369-5274]](99)80016-2
  - Rossier, O., Wengelnik, K., Hahn, K., & Bonas, U. (1999). The //Xanthomonas//  Hrp type III system secretes proteins from plant and mammalian bacterial pathogens. Proceedings of the National Academy of Sciences, 96(16), 9368-9373. [[https://doi.org/10.1073/pnas.96.16.9368|https://doi.org/10.1073/pnas.96.16.9368]]
  - Szurek, B., Rossier, O., Hause, G., & Bonas, U. (2002). Type III‐dependent translocation of the //Xanthomonas//  AvrBs3 protein into the plant cell. Molecular microbiology, 46(1), 13-23. [[https://doi.org/10.1046/j.1365-2958.2002.03139.x|https://doi.org/10.1046/j.1365-2958.2002.03139.x]]
  - Kay, S., Hahn, S., Marois, E., Hause, G., & Bonas, U. (2007). A bacterial effector acts as a plant transcription factor and induces a cell size regulator. Science, 318(5850), 648-651. DOI: 10.1126/science.1144956
  - Boch, J., Scholze, H., Schornack, S., Landgraf, A., Hahn, S., Kay, S., … & Bonas, U. (2009). Breaking the code of DNA binding specificity of TAL-type III effectors. Science, 326(5959), 1509-1512. DOI: 10.1126/science.1178811
  - Moscou, M. J., & Bogdanove, A. J. (2009). A simple cipher governs DNA recognition by TAL effectors. Science, 326(5959), 1501-1501. DOI: 10.1126/science.1178817
  - Herbers, K., Conrads-Strauch, J., & Bonas, U. (1992). Race-specificity of plant resistance to bacterial spot disease determined by repetitive motifs in a bacterial avirulence protein. Nature, 356(6365), 172. [[https://doi.org/10.1038/356172a0|https://doi.org/10.1038/356172a0]]
  - Lee, A. H. Y., Middleton, M. A., Guttman, D. S., & Desveaux, D. (2013). Phytopathogen type III effectors as probes of biological systems. Microbial biotechnology, 6(3), 230-240. [[https://doi.org/10.1111/1751-7915.12042|https://doi.org/10.1111/1751-7915.12042]]
  - Gürlebeck, D., Szurek, B., & Bonas, U. (2005). Dimerization of the bacterial effector protein AvrBs3 in the plant cell cytoplasm prior to nuclear import. The Plant Journal, 42(2), 175-187. [[https://doi.org/10.1111/j.1365-313X.2005.02370.x|https://doi.org/10.1111/j.1365-313X.2005.02370.x]]
  - Marois, E., Van den Ackerveken, G., & Bonas, U. (2002). The //Xanthomonas//  type III effector protein AvrBs3 modulates plant gene expression and induces cell hypertrophy in the susceptible host. Molecular Plant-Microbe Interactions, 15(7), 637-646. [[https://doi.org/10.1094/MPMI.2002.15.7.637|https://doi.org/10.1094/MPMI.2002.15.7.637]]
  - Hopkins, C. M., White, F. F., Choi, S. H., Guo, A., & Leach, J. E. (1992). Identification of a family of avirulence genes from //Xanthomonas////oryzae//  pv. //oryzae//. Mol Plant Microbe Interact, 5(6), 451-459.
  - Heuer, H., Yin, Y. N., Xue, Q. Y., Smalla, K., & Guo, J. H. (2007). Repeat domain diversity of avrBs3-like genes in //Ralstonia////solanacearum//  strains and association with host preferences in the field. Appl. Environ. Microbiol., 73(13), 4379-4384. –DOI:– 10.1128/AEM.00367-07

reviews

  - Khan M, Seto D, Subramaniam R, Desveaux D (2018). Oh, the places they'll go! A survey of phytopathogen effectors and their host targets. Plant J. 93(4): 651-663. doi: [[https://doi.org/10.1111/tpj.13780|10.1111/tpj.13780]].
  - Lin YH, Machner MP (2017). Exploitation of the host cell ubiquitin machinery by microbial effector proteins. J. Cell Sci. 130(12): 1985-1996. doi: [[https://doi.org/10.1242/jcs.188482|10.1242/jcs.188482]].
  - Büttner D (2016). Behind the lines-actions of bacterial type III effector proteins in plant cells. FEMS Microbiol. Rev. 40(6): 894-937. doi: [[https://doi.org/10.1093/femsre/fuw026|10.1093/femsre/fuw026]].
  - Pfeilmeier S, Caly DL, Malone JG (2016). Bacterial pathogenesis of plants: future challenges from a microbial perspective: challenges in bacterial molecular plant pathology. Mol. Plant Pathol. 17(8): 1298-1313. doi: [[https://doi.org/10.1111/mpp.12427|10.1111/mpp.12427]].
  - Doyle EL, Stoddard BL, Voytas DF, Bogdanove AJ (2013). TAL effectors: highly adaptable phytobacterial virulence factors and readily engineered DNA-targeting proteins. Trends Cell Biol. 23(8): 390-398. doi: [[https://doi.org/10.1016/j.tcb.2013.04.003|10.1016/j.tcb.2013.04.003]].
  - Lewis JD, Lee A, Ma W, Zhou H, Guttman DS, Desveaux D (2011). The YopJ superfamily in plant-associated bacteria. Mol. Plant Pathol. 12(9): 928-937. doi: [[https://doi.org/10.1111/j.1364-3703.2011.00719.x|10.1111/j.1364-3703.2011.00719.x]].
  - Dean P (2011). Functional domains and motifs of bacterial type III effector proteins and their roles in infection. FEMS Microbiol. Rev. 35(6): 1100-1125. doi: [[https://doi.org/10.1111/j.1574-6976.2011.00271.x|10.1111/j.1574-6976.2011.00271.x]].
  - Scholze H, Boch J (2011). TAL effectors are remote controls for gene activation. Curr. Opin. Microbiol. 14(1): 47-53. doi: [[https://doi.org/10.1016/j.mib.2010.12.001|10.1016/j.mib.2010.12.001]].
  - Boch J, Bonas U (2010). //Xanthomonas//  AvrBs3 family-type III effectors: discovery and function. Annu. Rev Phytopathol. 48: 419-36. doi: [[https://doi.org/10.1146/annurev-phyto-080508-081936|10.1146/annurev-phyto-080508-081936]].
  - Büttner D, Bonas U (2010). Regulation and secretion of Xanthomonas virulence factors. FEMS Microbiol. Rev. 34(2): 107-133. doi:[[https://doi.org/10.1111/j.1574-6976.2009.00192.x|10.1111/j.1574-6976.2009.00192.x]].
  - Kay S, Bonas U (2009). How //Xanthomonas//  type III effectors manipulate the host plant. Curr. Opin. Microbiol. 12(1): 37-43. doi: [[https://doi.org/10.1016/j.mib.2008.12.006|10.1016/j.mib.2008.12.006]].
  - White FF, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of //Xanthomonas//. Mol. Plant Pathol. 10(6): 749-766. doi: [[https://doi.org/10.1111/j.1364-3703.2009.00590.x|10.1111/j.1364-3703.2009.00590.x]]

xopac

  - R.Q. Xu, S. Blanvillain, J.X. Feng, B.L. Jiang, X.Z. Li, H.Y. Wei, T. Kroj, E. Lauber, D. Roby, B. Chen, Y.Q. He, G.T. Lu, D.J. Tang, J. Vasse, M. Arlat, and J.L. Tang, AvrAC(Xcc8004), a type III effector with a leucine-rich repeat domain from //Xanthomonas campestris//  pathovar //campestris//  confers avirulence in vascular tissues of //Arabidopsis////thaliana//  ecotype Col-0. J Bacteriol 190 (2008) 343-55. 10.1128/JB.00978-07
  - A. Cerutti, A. Jauneau, M.-C. Auriac, E. Lauber, Y. Martinez, S. Chiarenza, N. Leonhardt, R. Berthomé, and L.D. Noël, Immunity at cauliflower hydathodes controls infection by //Xanthomonas campestris//  pv. //campestris//. Plant Physiol 174 (2017) 700-712. 10.1104/pp.16.01852
  - E. Guy, M. Lautier, M. Chabannes, B. Roux, E. Lauber, M. Arlat, and L.D. Noël, //xopAC//-triggered Immunity against //Xanthomonas//  Depends on Arabidopsis Receptor-Like Cytoplasmic Kinase Genes //PBL2//  and //RIPK//. PLoS One 8 (2013) e73469. 10.1371/journal.pone.0073469
  - F. Feng, F. Yang, W. Rong, X. Wu, J. Zhang, S. Chen, C. He, and J.M. Zhou, A //Xanthomonas//  uridine 5'-monophosphate transferase inhibits plant immune kinases. Nature 485 (2012) 114-8. 10.1038/nature10962
  - G. Wang, B. Roux, F. Feng, E. Guy, L. Li, N. Li, X. Zhang, M. Lautier, M.F. Jardinaud, M. Chabannes, M. Arlat, S. Chen, C. He, L.D. Noël, and J.M. Zhou, The Decoy Substrate of a Pathogen Effector and a Pseudokinase Specify Pathogen-Induced Modified-Self Recognition and Immunity in Plants. Cell Host Microbe 18 (2015) 285-95. 10.1016/j.chom.2015.08.004
  - E. Guy, A. Genissel, A. Hajri, M. Chabannes, P. David, S. Carrère, M. Lautier, B. Roux, T. Boureau, M. Arlat, S. Poussier, and L.D. Noël, Natural Genetic Variation of //Xanthomonas campestris//  pv. campestris Pathogenicity on Arabidopsis Revealed by Association and Reverse Genetics. MBio 4 (2013) e00538-12. 10.1128/mBio.00538-12

xopad

  - Teper, D. //et al.//  Identification of novel Xanthomonas euvesicatoria type III effector proteins by a machine-learning approach. //Mol. Plant Pathol.//**17**, 398–411 (2016)
  - Escalon, A. //et al.//  Variations in type III effector repertoires, pathological phenotypes and host range of Xanthomonas citri pv. citri pathotypes. //Mol. Plant Pathol.//**14**, 483–96 (2013).
  - Harrison, J. & Studholme, D. J. Draft genome sequence of //Xanthomonas axonopodis//  pathovar //vasculorum//  NCPPB 900. //FEMS Microbiol. Lett.//**360**, 113–6 (2014).
  - Wasukira, A. //et al.//  Genome-wide sequencing reveals two major sub-lineages in the genetically monomorphic pathogen //Xanthomonas campestris//  pathovar //musacearum//. //Genes (Basel).//**3**, 361–377 (2012).
  - Studholme, D. J. //et al.//  Genome-wide sequencing data reveals virulence factors implicated in banana //Xanthomonas//  wilt. //FEMS Microbiol. Lett.//**310**, 182–192 (2010).
  - Vicente, J. G., Rothwell, S., Holub, E. B. & Studholme, D. J. Pathogenic, phenotypic and molecular characterisation of //Xanthomonas nasturtii//  sp. nov. and //Xanthomonas floridensis//  sp. nov., new species of //Xanthomonas//  associated with watercress production in Florida. //Int. J. Syst. Evol. Microbiol.//**67**, 3645–3654 (2017).
  - Peeters, N. //et al.//  Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex. //BMC Genomics//**14**, 859 (2013).

xopae

  - Popov G, Majhi BB, Sessa G. 2018. Effector gene xopAE of //Xanthomonas euvesicatoria//  85-10 Is part of an operon and encodes an E3 ubiquitin ligase. J. Bacteriol. 16: 00104-18
  - Noel L, Thieme F, Nennstiel D, Bonas U. 2002. Two novel type III-secreted proteins of //Xanthomonas////campestris//  pv. //vesicatoria//  are encoded within the hrp pathogenicity island. J Bacteriol 184:1340-1348.
  - Popov G, Fraiture M, Brunner F, Sessa G. 2016. Multiple //Xanthomonas////euvesicatoria//  type III effectors inhibit flg22-triggered immunity. Mol Plant-Microbe Interact 29:651-60.

xopaf

  - Minsavage, G.V ., Jones, J.B., Stall, R.E. (1996). Cloning and sequencing of an avirulence gene (avrRxv3) isolated from Xanthomonas campestris pv. vesicatoria tomato race 3. Phytopathology, 86, S15
  - Roden, A.J., Belt, B., Ross, B.J., Tachibana, T., Vargas, J., Mudgett, B.M. (2004) A genetic screen to isolate type III effectors traslocated into pepper cells during //Xanthomonas//  infection. PNAS 101(47) : 16624-16629.
  - Astua-Monge, G., Minsavage, V.G., Stall, E.R., Davis, J.M., Bonas, U., Jones, B.J. (2000) : Resistance of Tomato and Pepper to T3 Strains of //Xanthomonas campestris//  pv. vesicatoria Is Specified by a Plant-Inducible Avirulence Gene. Molecular Plant-Microbe Interactions, 13 (9), 2000/913.
  - Washington, E.J., Mukhtar, M.S., Finkel, M.O., Wan, L., Banfield, J.M., Kieber, J.J., Dangl, L.J. (2016). Pseudomonas syringae type III effector HopAF1 suppresses plant immunity by targeting methionine recycling to block ethylene induction. Proc Natl Acad Sci USA,. 113 (25) E3577-E3586.

xopah

  - Qian W, Jia Y, Ren S X, He Y Q, Feng J X, Lu L F, Sun Q, Ying G, Tang D J, Tang H, Wu W, Hao P, Wang L, Jiang B L, Zeng S, Gu W Y, Lu G, Rong L, Tian Y, Yao Z, Fu G, Chen B, Fang R, Qiang B, Chen Z, Zhao G P, Tang J L and He C (2005) Comparative and functional genomic analyses of the pathogenicity of phytopathogen //Xanthomonas campestris//  pv. //campestris.//  Genome Research 15: 757-767. doi: 10.1101/gr.3378705
  - Wang L, Tang, X, He, C (2007) The bifunctional effector AvrXccC of //Xanthomonas campestris//  pv. //campestris//  requires plasma membrane‐anchoring for host recognition. Mol. Plant Pathology 8: 491-501. doi: 10.1111/j.1364-3703.2007.00409.x
  - Castenada A, Reddy J D, El-Yacoubi B, Gabriel, D W (2005) Mutagenesis of all eight avr genes in //Xanthomonas campestris//  pv. //campestris//  had no detected effect on pathogenicity, but one avr gene affected race specificity. Mol. Plant Microbe Interactions 18: 1306-1317. doi: 10.1094/MPMI-18-1306.

xopaj

  - Zhao B, Ardales EY, Raymundo A, Bai J, Trick HN, Leach JE, Hulbert SH (2004-Jul). The avrRxo1 gene from the rice pathogen //Xanthomonas oryzae//  pv. //oryzicola//  confers a nonhost defense reaction on maize with resistance gene //Rxo1//. Mol. Plant Microbe Interact. 17(7): 771-779.
  - Zhao B, Lin X, Poland J, Trick H, Leach J, Hulbert S (2005-Oct). A maize resistance gene functions against bacterial streak disease in rice. Proc. Natl. Acad. Sci. U. S. A. 102(43): 15383-15388.
  - Xie XW, Yu J, Xu JL, Zhou YL, Li ZK (2007-Jul). Introduction of a non-host gene //Rxo1//  cloned from maize resistant to rice bacterial leaf streak into rice varieties. Sheng Wu Gong Cheng Xue Bao 23(4): 607-611.
  - Salomon D, Dar D, Sreeramulu S, Sessa G (2011-Mar). Expression of //Xanthomonas////campestris//  pv. //vesicatoria//  type III effectors in yeast affects cell growth and viability. Mol. Plant Microbe Interact. 24(3): 305-314. doi: 10.1094/MPMI-09-10-0196.
  - Wonni I, Cottyn B, Detemmerman L, Dao S, Ouedraogo L, Sarra S, Tekete C, Poussier S, Corral R, Triplett L, Koita O, Koebnik R, Leach J, Szurek B, Maes M, Verdier V (2014-May). Analysis of //Xanthomonas oryzae//  pv. //oryzicola//  population in Mali and Burkina Faso reveals a high level of genetic and pathogenic diversity. Phytopathology 104(5): 520-531. doi: 10.1094/PHYTO-07-13-0213-R.
  - Bahadur RP, Basak J (2014-Apr). Molecular modeling of protein-protein interaction to decipher the structural mechanism of nonhost resistance in rice. J. Biomol. Struct. Dyn. 32(4): 669-681. doi: 10.1080/07391102.2013.787370.
  - Ji ZY, Xiong L, Zou LF, Li YR, Ma WX, Liu L, Zakria M, Ji GH, Chen GY (2014-Sep). AvrXa7-Xa7 mediated defense in rice can be suppressed by transcriptional activator-like effectors TAL6 and TAL11a from //Xanthomonas oryzae//  pv. //oryzicola//. Mol. Plant Microbe Interact. 27(9): 983-995. doi: 10.1094/MPMI-09-13-0279-R. Retraction in: Mol Plant Microbe Interact. (2014-Dec) 27(12): 1413.
  - Liu H, Chang Q, Feng W, Zhang B, Wu T, Li N, Yao F, Ding X, Chu Z (2014-Dec). Domain dissection of AvrRxo1 for suppressor, avirulence and cytotoxicity functions. PLoS One 9(12): e113875. doi: 10.1371/journal.pone.0113875.
  - Han Q, Zhou C, Wu S, Liu Y, Triplett L, Miao J, Tokuhisa J, Deblais L, Robinson H, Leach JE, Li J, Zhao B (2015-Oct). Crystal structure of //Xanthomonas//  AvrRxo1-ORF1, a type III effector with a polynucleotide kinase domain, and its interactor AvrRxo1-ORF2. Structure 23(10): 1900-1909. doi: 10.1016/j.str.2015.06.030.
  - Triplett LR, Shidore T, Long J, Miao J, Wu S, Han Q, Zhou C, Ishihara H, Li J, Zhao B, Leach JE (2016-Jul). AvrRxo1 Is a bifunctional type III secreted effector and toxin-antitoxin system component with homologs in diverse environmental contexts. PLoS One 11(7): e0158856. doi: 10.1371/journal.pone.0158856.
  - Popov G, Fraiture M, Brunner F, Sessa G (2016-Aug). Multiple //Xanthomonas euvesicatoria//  type III effectors inhibit flg22-triggered immunity. Mol. Plant Microbe Interact. 29(8): 651-660. doi: 10.1094/MPMI-07-16-0137-R.
  - Schuebel F, Rocker A, Edelmann D, Schessner J, Brieke C, Meinhart A (2016-Oct). 3'-NADP and 3'-NAADP, two metabolites formed by the bacterial type III effector AvrRxo1. J. Biol. Chem. 291(44): 22868-22880. doi: 10.1074/jbc.M116.751297.
  - Shidore T, Broeckling CD, Kirkwood JS, Long JJ, Miao J, Zhao B, Leach JE, Triplett LR (2017-Jun). The effector AvrRxo1 phosphorylates NAD in planta. PLoS Pathog. 13(6): e1006442. doi: 10.1371/journal.ppat.1006442.

xopak

  - Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria//  type III effector proteins by a machine‐learning approach. Mol. Plant Pathol. 17(3): 398-411. doi: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
  - Barak JD, Vancheva T, Lefeuvre P, Jones JB, Timilsina S, Minsavage GV, Vallad GE, Koebnik R (2016) Whole-Genome Sequences of //Xanthomonas euvesicatoria//  strains clarify taxonomy and reveal a stepwise erosion of Type 3 Effectors. Front. Plant Sci. doi: [[https://doi.org/10.3389/fpls.2016.01805|10.3389/fpls.2016.01805]]
  - Li G, Froehlich JE, Elowsky C, Msanne J, Ostosh AC, Zhang C, Awada T, Alfano JR (2014) Distinct Pseudomonas type-III effectors use a cleavable transit peptide to target chloroplasts. Plant J. 77: 310–321, doi: [[https://doi.org/10.1111/tpj.12396|**10.1111/tpj.12396**]]

xopal1

  - Jiang W, Jiang BL, Xu RQ, Huang JD, Wei HY, Jiang GF, Cen WJ, Liu J, Ge YY, Li GH, Su LL, Hang XH, Tang DJ, Lu GT, Feng JX, He YQ, Tang JL (2009). Identification of six type III effector genes with the PIP box in //Xanthomonas campestris//  pv. //campestris//  and five of them contribute individually to full pathogenicity. Mol Plant Microbe Interact. 22:1401-1411. doi: 10.1094/MPMI-22-11-1401.
  - Roux B, Bolot S, Guy E, Denancé N, Lautier M, Jardinaud MF, Fischer-Le Saux M, Portier P, Jacques MA, Gagnevin L, Pruvost O, Lauber E, Arlat M, Carrère S, Koebnik R, Noël LD (2015). Genomics and transcriptomics of //Xanthomonas campestris//  species challenge the concept of core type III effectome. BMC Genomics. 16: 975. doi: 10.1186/s12864-015-2190-0.
  - Bogdanove AJ, Koebnik R, Lu H, Furutani A, Angiuoli SV, Patil PB, Van Sluys MA, Ryan RP, Meyer DF, Han SW, Aparna G, Rajaram M, Delcher AL, Phillippy AM, Puiu D, Schatz MC, Shumway M, Sommer DD, Trapnell C, Benahmed F, Dimitrov G, Madupu R, Radune D, Sullivan S, Jha G, Ishihara H, Lee SW, Pandey A, Sharma V, Sriariyanun M, Szurek B, Vera-Cruz CM, Dorman KS, Ronald PC, Verdier V, Dow JM, Sonti RV, Tsuge S, Brendel VP, Rabinowicz PD, Leach JE, White FF, Salzberg SL.(2011). Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic //Xanthomonas//  spp. J Bacteriol. 193: 5450-64. doi: 10.1128/JB.05262-11.
  - Peeters N, Carrère S, Anisimova M, Plener L, Cazalé AC, Genin S. (2013). Repertoire, unified nomenclature and evolution of the Type III effector gene set in the //Ralstonia solanacearum//  species complex. BMC Genomics. 14: 859. doi: 10.1186/1471-2164-14-859.
  - Nissinen RM, Ytterberg AJ, Bogdanove AJ, VAN Wijk KJ, Beer SV. (2007). Analyses of the secretomes of //Erwinia amylovora//  and selected hrp mutants reveal novel type III secreted proteins and an effect of HrpJ on extracellular harpin levels. Mol Plant Pathol. 8:55-67. doi: 10.1111/j.1364-3703.2006.00370.x.
  - Bocsanczy AM, Schneider DJ, DeClerck GA, Cartinhour S, Beer SV. (2012). HopX1 in //Erwinia amylovora//  functions as an avirulence protein in apple and is regulated by HrpL. J Bacteriol. 194 :553-560. doi: 10.1128/JB.05065-11.

xopal2

  - Vorhölter FJ, Schneiker S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Rückert C, Schmid J, Sidhu VK, Sieber V, Tauch A, Watt SA, Weisshaar B, Becker A, Niehaus K, Pühler A. (2008). The genome of //Xanthomonas campestris//  pv. //campestris//  B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. J Biotechnol. 134: 33-45. doi: 10.1016/j.jbiotec.2007.12.013.
  - Roux B, Bolot S, Guy E, Denancé N, Lautier M, Jardinaud MF, Fischer-Le Saux M, Portier P, Jacques MA, Gagnevin L, Pruvost O, Lauber E, Arlat M, Carrère S, Koebnik R, Noël LD (2015). Genomics and transcriptomics of //Xanthomonas campestris//  species challenge the concept of core type III effectome. BMC Genomics. 16: 975. doi: 10.1186/s12864-015-2190-0.
  - Peeters N, Carrère S, Anisimova M, Plener L, Cazalé AC, Genin S. (2013). Repertoire, unified nomenclature and evolution of the Type III effector gene set in the //Ralstonia solanacearum//  species complex. BMC Genomics. 14: 859. doi: 10.1186/1471-2164-14-859.
  - Nissinen RM, Ytterberg AJ, Bogdanove AJ, VAN Wijk KJ, Beer SV. (2007). Analyses of the secretomes of //Erwinia amylovora//  and selected hrp mutants reveal novel type III secreted proteins and an effect of HrpJ on extracellular harpin levels. Mol Plant Pathol. 8:55-67. doi: 10.1111/j.1364-3703.2006.00370.x.
  - Bocsanczy AM, Schneider DJ, DeClerck GA, Cartinhour S, Beer SV. (2012). HopX1 in //Erwinia amylovora//  functions as an avirulence protein in apple and is regulated by HrpL. J Bacteriol. 194 :553-560. doi: 10.1128/JB.05065-11.

xopap

  - Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria//  type III effector proteins by a machine‐learning approach. Mol. Plant Pathol. 17(3): 398-411. doi: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
  - Popov G, Fraiture M, Brunner F, Sessa G (2018). Multiple //Xanthomonas euvesicatoria//  type III effectors inhibit flg22-triggered immunity. Mol. Plant-Microbe Interact. 29(8):651-660. doi: [[https://doi.org/10.1094/MPMI-07-16-0137-R|https://doi.org/10.1094/MPMI-07-16-0137-R]]
  - Peeters N, Carrere S, Anisimova M, Plener L, Cazale AC, Genin S (2013). Repertoire, unified nomenclature and evolution of the type III effector gene set in the //Ralstonia solanacearum//  species complex. BMC Genom. 14: 859. doi: [[https://doi.org/10.1186/1471-2164-14-859|https://doi.org/10.1186/1471-2164-14-859]]
  - Nakano M, Mukaihara T (2018). //Ralstonia solanacearum//  type III effector RipAL targets chloroplasts and induces jasmonic acid production to suppress salicylic acid-mediated responses in plants. Plant Cell Physiol. 59(12):2576-2589. doi: 10.1093/pcp/pcy177.

xopaq

  - Escalon A, Javegny S, Vernière C, Noël LD, Vital K, Poussier S, Hajri A, Boureau T, Pruvost O, Arlat M, Gagnevin L. Variations in type III effector repertoires, pathological phenotypes and host range of Xanthomonas citri pv. citri pathotypes. Mol Plant Pathol. 2013 Jun;14(5):483-96. doi:10.1111/mpp.12019.
  - Dalio RJD, Magalhães DM, Rodrigues CM, Arena GD, Oliveira TS, Souza-Neto RR, Picchi SC, Martins PMM, Santos PJC, Maximo HJ, Pacheco IS, De Souza AA, Machado MA. PAMPs, PRRs, effectors and R-genes associated with citrus-pathogen interactions. Ann Bot. 2017 Mar 1;119(5):749-774. doi: 10.1093/aob/mcw238.
  - Schwartz AR, Potnis N, Timilsina S, Wilson M, Patané J, Martins J Jr,Minsavage GV, Dahlbeck D, Akhunova A, Almeida N, Vallad GE, Barak JD, White FF, Miller SA, Ritchie D, Goss E, Bart RS, Setubal JC, Jones JB, Staskawicz BJ. Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity. Front Microbiol. 2015 Jun 3;6:535. doi: 10.3389/fmicb.2015.00535.
  - Ferreira MASV, Bonneau S, Briand M, Cesbron S, Portier P, Darrasse A, Gama MAS, Barbosa MAG, Mariano RLR, Souza EB, Jacques MA. Xanthomonas citri pv. viticola Affecting Grapevine in Brazil: Emergence of a Successful Monomorphic Pathogen. Front Plant Sci. 2019 Apr 18;10:489. doi: 10.3389/fpls.2019.00489.
  - Garita-Cambronero J, Sena-Vélez M, Ferragud E, Sabuquillo P, Redondo C, Cubero J. Xanthomonas citri subsp. citri and Xanthomonas arboricola pv. pruni: Comparative analysis of two pathogens producing similar symptoms in different host plants. PLoS One. 2019 Jul 18;14(7):e0219797. doi: 10.1371/journal.pone.0219797.
  - Garita-Cambronero J, Palacio-Bielsa A, Cubero J. Xanthomonas arboricola pv. pruni, causal agent of bacterial spot of stone fruits and almond: its genomic and phenotypic characteristics in the X. arboricola species context. Mol Plant Pathol. 2018 Sep;19(9):2053-2065. doi: 10.1111/mpp.12679.
  - Garita-Cambronero J, Palacio-Bielsa A, López MM, Cubero J. Comparative Genomic and Phenotypic Characterization of Pathogenic and Non-Pathogenic Strains of Xanthomonas arboricola Reveals Insights into the Infection Process of Bacterial Spot Disease of Stone Fruits. PLoS One. 2016 Aug 29;11(8):e0161977. doi: 10.1371/journal.pone.0161977.
  - Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB. Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics. 2011 Mar 11;12:146. doi: 10.1186/1471-2164-12-146.
  - Jalan N, Kumar D, Andrade MO, Yu F, Jones JB, Graham JH, White FF, Setubal JC,Wang N. Comparative genomic and transcriptome analyses of pathotypes of Xanthomonas citri subsp. citri provide insights into mechanisms of bacterial virulence and host range. BMC Genomics. 2013 Aug 14;14:551. doi: 10.1186/1471-2164-14-551.
  - Jibrin MO, Potnis N, Timilsina S, Minsavage GV, Vallad GE, Roberts PD, Jones JB, Goss EM. Genomic Inference of Recombination-Mediated Evolution in Xanthomonas euvesicatoria and X. perforans. Appl Environ Microbiol. 2018 Jun 18;84(13). pii: e00136-18. doi: 10.1128/AEM.00136-18.
  - Barak JD, Vancheva T, Lefeuvre P, Jones JB, Timilsina S, Minsavage GV, Vallad GE, Koebnik R. Whole-Genome Sequences of Xanthomonas euvesicatoria Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors. Front Plant Sci. 2016 Dec 9;7:1805. doi: 10.3389/fpls.2016.01805.
  - Mukaihara T, Tamura N, Iwabuchi M. Genome-wide identification of a large repertoire of Ralstonia solanacearum type III effector proteins by a new functional screen. Mol Plant Microbe Interact. 2010 Mar;23(3):251-62. doi:10.1094/MPMI-23-3-0251.
  - Garita-Cambronero J. Doctoral Thesis. Genómica comparativa de cepas de //Xanthomonas arborícola//  asociadas a //Prunus ssp//. Caracterización de los procesos de infección de la mancha bacteriana de frutales de hueso y almendro. 2016. Universidad Politécnica de Madrid.

xopau

  - Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria//  type III effector proteins by a machine‐learning approach. Mol. Plant Pathol. 17(3): 398-411. doi: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
  - Teper D, Girija AM, Bosis E, Popov G, Savidor A, Sessa G (2018). The //Xanthomonas////euvesicatoria//  type III effector XopAU is an active protein kinase that manipulates plant MAP kinase signaling. PLoS Pathog. 14(1): e1006880. doi: [[https://doi.org/10.1371/journal.ppat.1006880|10.1371/journal.ppat.1006880]]
  - Guo Y, Figueiredo F, Jones J, Wang N (2011). HrpG and HrpX play global roles in coordinating different virulence traits of //Xanthomonas axonopodis//  pv. //citri//. Mol. Plant Microbe Interact. 24(6): 649-661. doi: [[https://doi.org/10.1094/MPMI-09-10-0209|10.1094/MPMI-09-10-0209]]
  - Dubrow Z, Sunitha S, Kim JG, Aakre CD, Girija AM, Sobol G, Teper D, Chen YC, Ozbaki-Yagan N, Vance H, Sessa G, Mudgett MB (2018). Tomato 14-3-3 proteins are required for //Xv3//  disease resistance and interact with a subset of //Xanthomonas euvesicatoria//  effectors. Mol. Plant Microbe Interact. 31(12): 1301-1311. doi: [[https://doi.org/10.1094/MPMI-02-18-0048-R|10.1094/MPMI-02-18-0048-R]]

xopaw

  - Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel //Xanthomonas euvesicatoria//  type III effector proteins by a machine‐learning approach. Mol. Plant Pathol. 17(3): 398-411. doi: [[https://doi.org/10.1111/mpp.12288|10.1111/mpp.12288]]
  - Popov G, Fraiture M, Brunner F, Sessa G (2018). Multiple //Xanthomonas euvesicatoria//  type III effectors inhibit flg22-triggered immunity. Mol. Plant-Microbe Interact. 29(8):651-660. doi: [[https://doi.org/10.1094/MPMI-07-16-0137-R|https://doi.org/10.1094/MPMI-07-16-0137-R]]

xopb

  - Noël L, Thieme F, Nennstiel D, Bonas U (2001). cDNA-AFLP analysis unravels a genome-wide //hrpG//-regulon in the plant pathogen //Xanthomonas campestris//  pv. //vesicatoria//. Mol. Microbiol. 41(6): 1271-1281. doi: [[https://doi.org/10.1046/j.1365-2958.2001.02567.x|10.1046/j.1365-2958.2001.02567.x]].
  - Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of //Xanthomonas campestris//  pv. //vesicatoria//  type III effectors in yeast affects cell growth and viability. Mol. Plant Microbe Interact. 24(3): 305-314. doi: [[https://doi.org/10.1094/MPMI-09-10-0196|10.1094/MPMI-09-10-0196]].
  - Schulze S, Kay S, Büttner D, Egler M, Eschen-Lippold L, Hause G, Krüger A, Lee J, Müller O, Scheel D, Szczesny R, Thieme F, Bonas U (2012). Analysis of new type III effectors from //Xanthomonas//  uncovers XopB and XopS as suppressors of plant immunity. New Phytol. 195(4): 894-911. doi: [[https://doi.org/10.1111/j.1469-8137.2012.04210.x|10.1111/j.1469-8137.2012.04210.x]].
  - Sonnewald S, Priller JP, Schuster J, Glickmann E, Hajirezaei MR, Siebig S, Mudgett MB, Sonnewald U (2012). Regulation of cell wall-bound invertase in pepper leaves by //Xanthomonas campestris//  pv. //vesicatoria//  type three effectors. PLoS One 7(12): e51763. doi: [[https://doi.org/10.1371/journal.pone.0051763|10.1371/journal.pone.0051763]].
  - Harrison J, Studholme DJ (2014). Draft genome sequence of //Xanthomonas axonopodis//  pathovar //vasculorum//  NCPPB 900. FEMS Microbiol. Lett. 360(2): 113-116. doi: [[https://doi.org/10.1111/1574-6968.12607|10.1111/1574-6968.12607]].
  - Priller JP, Reid S, Konein P, Dietrich P, Sonnewald S (2016). The //Xanthomonas campestris//  pv. //vesicatoria//  type-3 effector XopB inhibits plant defence responses by interfering with ROS production. PLoS One 11(7): e0159107. doi: [[https://doi.org/10.1371/journal.pone.0159107|10.1371/journal.pone.0159107]].
  - Prochaska H, Thieme S, Daum S, Grau J, Schmidtke C, Hallensleben M, John P, Bacia K, Bonas U (2018). A conserved motif promotes HpaB-regulated export of type III effectors from //Xanthomonas//. Mol. Plant Pathol. 19(11): 2473-2487. doi: [[https://doi.org/10.1111/mpp.12725|10.1111/mpp.12725]].

xopc

  - Noël L, Thieme F, Nennstiel D, Bonas U (2001). cDNA-AFLP analysis unravels a genome-wide //hrpG//-regulon in the plant pathogen //Xanthomonas campestris//  pv. //vesicatoria//. Mol. Microbiol. 41(6): 1271-1281. doi: [[https://doi.org/10.1046/j.1365-2958.2001.02567.x|10.1046/j.1365-2958.2001.02567.x]].
  - Noël L, Thieme F, Gäbler J, Büttner D, Bonas U (2003). **XopC**  and XopJ, two novel type III effector proteins from //Xanthomonas campestris//  pv. vesicatoria. J Bacteriol. 185(24):7092-102. doi: [[https://doi.org/10.1128/jb.185.24.7092-7102.2003|10.1128/jb.185.24.7092-7102.2003]]
  - Szurek, B, Rossier O, Hause G, Bonas U (2002). Type III-dependent translocation of the //Xanthomonas//  AvrBs3 protein into the plant cell. Mol.Microbiol. 46(1):13–23. doi:[[https://doi.org/10.1046/j.1365-2958.2002.03139.x|10.1016/j.jplph.2005.11.011]]
  - Büttner D, Lorenz C, Weber E, Bonas U (2006). Targeting of two effector protein classes to the type III secretion system by a HpaC- and HpaB-dependent protein complex from //Xanthomonas campestris//  pv. //vesicatoria//. Mol Microbiol. 59(2):513-27. doi: [[https://doi.org/10.1111/j.1365-2958.2005.04924.x|10.1111/j.1365-2958.2005.04924.x]]
  - Adlung N, Prochaska H, Thieme S, Banik A, Blüher D, John P, Nagel O, Schulze S, Gantner J, Delker C, Stuttmann J, Bonas U (2006). Non-host Resistance Induced by the //Xanthomonas//  Effector XopQ Is Widespread within the Genus //Nicotiana//  and Functionally Depends on EDS1. Front Plant Sci. 30;7:1796. doi: [[https://doi.org/10.3389/fpls.2016.01796|10.3389/fpls.2016.01796]]
  - Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of //Xanthomonas campestris//  pv. //vesicatoria//  type III effectors in yeast affects cell growth and viability. Mol. Plant Microbe Interact. 24(3): 305-314. doi: [[https://doi.org/10.1094/MPMI-09-10-0196|10.1094/MPMI-09-10-0196]].

xopd

  - Rawlings, N. D., Morton, F. R., & Barrett, A. J. (2006). MEROPS: the peptidase database. Nucleic acids research, 34(suppl_1), D270-D272; doi: [[https://doi.org/10.1093/nar/gkj089|10.1093/nar/gkj089]]
  - Noel, L., Thieme, F., Nennstiel, D., and Bonas, U. (2002) Two novel type III-secreted proteins of //Xanthomonas campestris//  pv. //vesicatoria//  are encoded within the hrp pathogenicity island. //J Bacteriol//  184: 1340–1348. DOI: 10.1128/JB.184.5.1340–1348.2002
  - Chosed, R., Tomchick, D. R., Brautigam, C. A., Mukherjee, S., Negi, V. S., Machius, M., & Orth, K. (2007). Structural analysis of Xanthomonas XopD provides insights into substrate specificity of ubiquitin-like protein proteases. //Journal of Biological Chemistry//, //282//  (9), 6773-6782.
  - Hotson, A., Chosed, R., Shu, H., Orth, K., & Mudgett, M. B. (2003). Xanthomonas type III effector XopD targets SUMO‐conjugated proteins in planta. //Molecular microbiology//, //50//  (2), 377-389.
  - Li, S.J., and Hochstrasser, M. (1999) A new protease required for cell-cycle progression in yeast. Nature 398: 246–251.
  - Kim, J. G., Taylor, K. W., Hotson, A., Keegan, M., Schmelz, E. A., & Mudgett, M. B. (2008). XopD SUMO protease affects host transcription, promotes pathogen growth, and delays symptom development in Xanthomonas-infected tomato leaves. The Plant Cell, 20(7), 1915-1929.
  - Ohta, M., Matsui, K., Hiratsu, K., Shinshi, H., & Ohme-Takagi, M. (2001). Repression domains of class II ERF transcriptional repressors share an essential motif for active repression. //The Plant Cell//, //13//  (8), 1959-1968.
  - Kim, J. G., Taylor, K. W., & Mudgett, M. B. (2011). Comparative analysis of the XopD type III secretion (T3S) effector family in plant pathogenic bacteria. Molecular plant pathology, 12(8), 715-730.
  - Kim JG, Stork W, Mudgett MB (2013) Xanthomonas type III effector XopD desumoylates tomato transcriptionfactor SlERF4 to suppress ethylene responses and promote pathogen
  - Innes, R. W., A. F. Bent, B. N. Kunkel, S. R. Bisgrove, and B. J. Staskawicz.1993. Molecular analysis of avirulence gene //avrRpt2//  and identification of a putative regulatory sequence common to all known //Pseudomonas syringae//  avirulence genes. J. Bacteriol. 175:4859–4869.
  - Canonne J, Marino D, Jauneau A, Pouzet C, Brière C, et al. (2011) The Xanthomonas type III effector XopD targets the Arabidopsis transcription factor MYB30 to suppress plant defense. Plant Cell 23: 3498–3511. doi: 0.1105/tpc.111.088815 PMID: 21917550
  - Castaneda A, Reddy JD, El-Yacoubi B, Gabriel DW. Mutagenesis of all eight avr genes in Xanthomonas campestris pv. campestris had no detected effect on pathogenicity, but one avr gene affected race specificity. Molecular Plant-Microbe Interactions. 2005; 18:1306–1317.

xope1

  - da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira, MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA,Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos SM, Truffi D, Tsai, SM, White FF, Setubal JC, Kitajima JP (2002). Comparison of the genomes of two //Xanthomonas//  pathogens with differing host specificities. Nature 417(6887):459–463. doi: 10.1038/417459a
  - Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Büttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klösgen U, Patschkowski T, Rückert C, Rupp O, Schneiker S, Schuster SC, Vorhölter F, Weber E, Pühler A, Bonas U, Bartels D, Kaiser O (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium //Xanthomonas campestris//  pv. vesicatoria revealed by the complete genome sequence. J. Bacteriol. 187 (21) :7254-7266. doi:10.1128/JB.187.21.7254-7266.2005
  - Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from //Xanthomonas campestris//  pv. vesicatoria trigger plant reactions dependent on a conserved N-myristoylation motif. Mol Plant Microbe In. 20(10):1250–61. doi:10.1094/MPMI-20-10-1250
  - Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of //Xanthomonas campestris//  pv. vesicatoria type III effectors in yeast affects cell growth and viability. Mol Plant Microbe In. 24 (3):305–314. doi:10.1094/MPMI-09-10-0196
  - Adlung N, Prochaska H, Thieme S, Banik A, Blüher D, John P, Nagel O, Schulze S, Gantner J, Delker C, Stuttmann J, Bonas U(2016). Non-host resistance induced by the //Xanthomonas//  Effector XopQIs Widespread within the Genus Nicotiana and Functionally Depends on EDS1. Front.Plant Sci.7:1796. doi: 10.3389/fpls.2016.01796
  - Dubrow Z, Sunitha S, Kim JG, Aakre CD, Girija AM, Sobol G, Teper D, Chen YC, Ozbaki-Yagan N, Vance H, Sessa G, Mudgett MB (2018). Tomato 14-3-3 proteins are required for Xv3 disease resistance and interact with a subset of //Xanthomonas euvesicatoria//  effectors. Mol Plant Microbe Interact. 31(12):1301-1311. doi: 10.1094/MPMI-02-18-0048-R
  - Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of //Pseudomonas syringae//  type IIIeffectors require a catalytic triad and a novel N-terminal domain forfunction. Mol. Plant-Microbe Interact. 20(4):346-357. doi: 10.1094/MPMI-20-4-0346
  - Assis RAB, Polloni LC, Patané JSL, Thakur S, Felestrino ÉB, Diaz-Caballero J, Digiampietri LA, Goulart LR, Almeida NF, Nascimento R, Dandekar AM, Zaini PA, Setubal JC, Guttman DS, Moreira LM (2017). Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae. Sci. Rep. 7:16133. doi: 10.1038/s41598-017-16325-1

xope2

  - da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira, MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA,Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos SM, Truffi D, Tsai, SM, White FF, Setubal JC, Kitajima JP (2002). Comparison of the genomes of two //Xanthomonas//  pathogens with differing host specificities. Nature 417(6887):459–463. doi: 10.1038/417459a
  - Li RH, Peng CW, Lin YC, Peng HL, Huang HC (2011). The xopE2 effector protein of //Xanthomonas campestris//  pv. vesicatoria is involved in virulence and in the suppression of the hypersensitive response. Bot. Stud. 52(1):55-72.
  - Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Büttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klösgen U, Patschkowski T, Rückert C, Rupp O, Schneiker S, Schuster SC, Vorhölter F, Weber E, Pühler A, Bonas U, Bartels D, Kaiser O (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium //Xanthomonas campestris//  pv. vesicatoria revealed by the complete genome sequence. J. Bacteriol. 187 (21) :7254-7266. doi:10.1128/JB.187.21.7254-7266.2005
  - Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from //Xanthomonas campestris//  pv. vesicatoria trigger plant reactions dependent on a conserved N-myristoylation motif. Mol Plant Microbe In. 20(10):1250–61. doi:10.1094/MPMI-20-10-1250
  - Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of //Xanthomonas campestris//  pv. vesicatoria type III effectors in yeast affects cell growth and viability. Mol Plant Microbe In. 24 (3):305–314. doi:10.1094/MPMI-09-10-0196
  - Dubrow Z, Sunitha S, Kim JG, Aakre CD, Girija AM, Sobol G, Teper D, Chen YC, Ozbaki-Yagan N, Vance H, Sessa G, Mudgett MB (2018). Tomato 14-3-3 proteins are required for Xv3 disease resistance and interact with a subset of //Xanthomonas euvesicatoria//  effectors. Mol Plant Microbe Interact. 31(12):1301-1311. doi: 10.1094/MPMI-02-18-0048-R
  - Popov G, Fraiture M, Brunner F, Sessa G (2016). Multiple //Xanthomonas euvesicatoria//  type III effectors inhibit flg22-triggered immunity. Mol. Plant Microbe Interact. 29(8):651–660. doi: 10.1094/MPMI-07-16-0137-R
  - Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of //Pseudomonas syringae//  type IIIeffectors require a catalytic triad and a novel N-terminal domain forfunction. Mol. Plant-Microbe Interact. 20(4):346-357. doi: 10.1094/MPMI-20-4-0346
  - Assis RAB, Polloni LC, Patané JSL, Thakur S, Felestrino ÉB, Diaz-Caballero J, Digiampietri LA, Goulart LR, Almeida NF, Nascimento R, Dandekar AM, Zaini PA, Setubal JC, Guttman DS, Moreira LM (2017). Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae. Sci. Rep. 7:16133. doi: 10.1038/s41598-017-16325-1

xope3

  - Dunger G, Garofalo CG, Gottig N, Garavaglia BS, Rosa MC, Farah CS, Orellano EG, Ottado J (2012). Analysis of three //Xanthomonas axonopodis//  pv. citri effector proteins in pathogenicity and their interactions with host plant proteins. Mol Plant Pathol. 13(8):865-76. doi: 10.1111/j.1364-3703.2012.00797.x
  - da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira, MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA,Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos SM, Truffi D, Tsai, SM, White FF, Setubal JC, Kitajima JP (2002). Comparison of the genomes of two //Xanthomonas//  pathogens with differing host specificities. Nature 417(6887):459–463. doi: 10.1038/417459a
  - Guo Y, Figueiredo F, Jones J, Wang N (2011). HrpG and HrpX play global roles in coordinating different virulence traits of //Xanthomonas axonopodis//  pv. citri. Mol Plant Microbe Interact. 24(6):649-61. doi: 10.1094/MPMI-09-10-0209
  - Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of //Pseudomonas syringae//  type IIIeffectors require a catalytic triad and a novel N-terminal domain forfunction. Mol. Plant-Microbe Interact. 20(4):346-357. doi: 10.1094/MPMI-20-4-0346

xope4

  - Moreira LM, Almeida NF Jr, Potnis N, Digiampietri LA, Adi SS, Bortolossi JC, da Silva AC, da Silva AM, de Moraes FE, de Oliveira JC, de Souza RF, Facincani AP, Ferraz AL, Ferro MI, Furlan LR, Gimenez DF, Jones JB, Kitajima EW, Laia ML, Leite RP Jr, Nishiyama MY, Rodrigues Neto J, Nociti LA, Norman DJ, Ostroski EH, Pereira HA Jr, Staskawicz BJ, Tezza RI, Ferro JA, Vinatzer BA, Setubal JC. (2010). Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of //Xanthomonas fuscans//  subsp. aurantifolii. BMC Genomics 11: 238. doi: 10.1186/1471-2164-11-238
  - Dalio RJD, Magalhães DM, Rodrigues CM, Arena GD, Oliveira TS, Souza-Neto RR, Picchi SC, Martins PMM, Santos PJC, Maximo HJ, Pacheco IS, De Souza AA, Machado MA (2017). PAMPs, PRRs, effectors and R-genes associated with citrus-pathogen interactions. Ann Bot. 119(5):749-774. doi: 10.1093/aob/mcw238
  - Medina CA, Reyes PA, Trujillo CA, Gonzalez JL, Bejarano DA, Montenegro NA, Jacobs JM, Joe A, Restrepo S, Alfano JR, Bernal A (2018). The role of type III effectors from //Xanthomonas axonopodis//  pv. manihotis in virulence and suppression of plant immunity. Mol Plant Pathol. 19(3):593-606. doi: 10.1111/mpp.12545
  - Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of //Pseudomonas syringae//  type IIIeffectors require a catalytic triad and a novel N-terminal domain forfunction. Mol. Plant-Microbe Interact. 20(4):346-357. doi: 10.1094/MPMI-20-4-0346

xope5

  - Peng Z, Hu Y, Xie J, Potnis N, Akhunova A, Jones J, Liu Z, White F, Liu S (2016). Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of //Xanthomonas translucens//. BMC Genomics 17:21. doi: 10.1186/s12864-015-2348-9
  - Falahi Charkhabi N, Booher NJ, Peng Z, Wang L, Rahimian H, Shams-Bakhsh M, Liu Z, Liu S, White FF, Bogdanove AJ (2017). Complete genome sequencing and targeted mutagenesis reveal virulence vontributions of Tal2 and Tal4b of //Xanthomonas translucens//  pv. undulosa ICMP11055 in bacterial leaf streak of wheat. Front. Microbiol. 10;8:1488. doi: 10.3389/fmicb.2017.01488.
  - Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of //Pseudomonas syringae//  type IIIeffectors require a catalytic triad and a novel N-terminal domain forfunction. Mol. Plant-Microbe Interact. 20(4):346-357. doi: 10.1094/MPMI-20-4-0346

xopf

  - Roden J, Belt B, Ross J, Tachibana T, Vargas J, Mudgett M (2004). A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection. Proc. Natl. Acad. Sci. 101(47): 16624-16629. doi: [[https://www.pnas.org/content/101/47/16624|10.1073/pnas.0407383101]]
  - Büttner D, Lorenz C, Weber E, Bonas U (2006). Targeting of two effector protein classes to the type III secretion system by a HpaC- and HpaB- dependent protein complex from //Xanthomonas campestris//  pv. //vesicatoria//. Mol. Microbiol. 59(2): 513-527.

xopg

  - Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Büttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klösgen U, Patschkowski T, Rückert C, Rupp O, Schneiker S, Schuster SC, Vorhölter FJ, Weber E, Pühler A, Bonas U, Bartels D, Kaiser O (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium //Xanthomonas campestris//  pv. //vesicatoria//  revealed by the complete genome sequence. J Bacteriol. 187 (21) : 7254-7266. doi : [[https://doi.org/10.1128/JB.187.21.7254-7266.2005|10.1128/JB.187.21.7254-7266.2005]]
  - Thieme F (2006). Genombasierte Identifizierung neuer potentieller Virulenzfaktoren von //Xanthomonas////campestris//  pv. //vesicatoria//. PhD dissertation. [[http://sundoc.bibliothek.uni-halle.de/diss-online/06/06H103/prom.pdf|http:<nowiki>//</nowiki>sundoc.bibliothek.uni-halle.de/diss-online/06/06H103/prom.pdf]]
  - Potnis N,Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol MT, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics. 12 (146) : 1-23. doi : [[https://doi.org/10.1186/1471-2164-12-146|10.1186/1471-2164-12-146]]
  - Schulze S, Kay S, Buttner D, Egler M, Eschen-Lippold L, Hause G, Kruger A, Lee J, Muller O, Scheel D, Szczesny R, Thieme F, Bonas U (2012). Analysis of new type III effectors from //Xanthomonas//  uncovers XopB and XopS as suppressors of plant immunity. New Phytologist. 195 : 894-911. doi : [[https://doi.org/10.1111/j.1469-8137.2012.04210.x|**10.1111/j.1469-8137.2012.04210.x**]]
  - White FF, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of //Xanthomonas//. Molecular Plant Pathology.10 (6) : 749-766. doi : [[https://doi.org/10.1111/j.1364-3703.2009.00590.x|10.1111/j.1364-3703.2009.00590.x]]
  - da Silva ACR, Ferro JA, Reinach FC, 1Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, et al (2002). Comparison of the genomes of two //Xanthomonas//  pathogens with differing host specificities. Nature. 417 (23) : 459-463. doi : [[https://doi.org/10.1038/417459a|10.1038/417459a]]

xoph

  - White F F, Potnis N, Jones JB, Koebnik R, White F F (2009). The type III effectors of Xanthomonas. Molecular Plant Pathology. 10: 749–766. doi: [[https://doi.org/10.1111/j.1364-3703.2009.00590.x|10.1111/J.1364-3703.2009.00590.X]]
  - Gurenn D, Thieme, F, Bonas U (2006). Type III effector proteins from the plant pathogen Xanthomonas and their role in the interaction with the host plant. Journal of Plant Physiology. 163: 233–255.doi: [[https://doi.org/10.1016/j.jplph.2005.11.011|10.1016/j.jplph.2005.11.011]]
  - Blüher D, Laha D, Thieme S, Hofer A, Eschen-Lippold L, Masch A, Balcke G, Pavlovic I, Nagel O, Schonsky A, Hinkelmann R, Wörner J, Parvin N, Greiner R, Weber S, Tissier A, Schutkowski M, Lee J, Jessen H, Schaaf G, Bonas U (2017). A 1-phytase type III effector interferes with plant hormone signaling. Nature Communications. 8: 1–14. doi: [[http://dx.doi.org/10.1038/s41467-017-02195-8|10.1038/s41467-017-02195-8]]
  - Popov G, Fraiture M, Brunner F, Sessa G (2016). Multiple //Xanthomonas euvesicatoria//  Type III Effectors Inhibit flg22-Triggered Immunity. Molecular Plant-Microbe Interactions. 29:651–660. doi: [[https://doi.org/10.1094/MPMI-07-16-0137-R|10.1094/mpmi-07-16-0137-r]]
  - Potnis N, Minsavage G, Smith J K, Hurlbert J C, Norman D, Rodrigues R, Stall R E, Jones JB (2012). Avirulence Proteins AvrBs7 from //Xanthomonas gardneri//  and AvrBs1.1 from //Xanthomonas euvesicatoria//  Contribute to a Novel Gene-for-Gene Interaction in Pepper. Molecular Plant-Microbe Interactions. 25: 307–320. doi: [[http://dx.doi.org/10.1094%20/MPMI%20-08-11-0205|10.1094/MPMI-08-11-0205]]

xopi

  - Schulze S., Kay S., Buttner D., Egler M., Eschen-Lippold L., Hause G., et al. (2012). Analysis of new type III effectors from //Xanthomonas//  uncovers XopB and XopS as suppressors of plant immunity. //New Phytol.//  195 894–911 10.1111/j.1469-8137.2012.04210.x [[https://nph.onlinelibrary.wiley.com/doi/epdf/10.1111/j.1469-8137.2012.04210.x|https:<nowiki>//</nowiki>nph.onlinelibrary.wiley.com/doi/epdf/10.1111/j.1469-8137.2012.04210.x]]
  - Salomon D, Dar D, Sreeramulu S, Sessa G. Expression of Xanthomonas campestris pv. vesicatoria type III effectors in yeast affects cell growth and viability. Mol Plant Microbe Interact. 2011 Mar;24(3):305-14. doi: 10.1094/MPMI-09-10-0196. [[https://apsjournals.apsnet.org/doi/pdf/10.1094/MPMI-09-10-0196|https:<nowiki>//</nowiki>apsjournals.apsnet.org/doi/pdf/10.1094/MPMI-09-10-0196]]
  - Teper D, Sunitha S, Martin GB, Sessa G. Five Xanthomonas type III effectors suppress cell death induced by components of immunity-associated MAP kinase cascades. Plant Signal Behav. 2015;10(10):e1064573. doi:10.1080/15592324.2015.1064573. [[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4883825/|https:<nowiki>//</nowiki>www.ncbi.nlm.nih.gov/pmc/articles/PMC4883825/]]
  - Üstün S1, Börnke F2. Interactions of Xanthomonas type-III effector proteins with the plant ubiquitin and ubiquitin-like pathways Front Plant Sci. 2014 Dec 18;5:736. doi: 10.3389/fpls.2014.00736. eCollection 2014. [[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4270169/#B34|https:<nowiki>//</nowiki>www.ncbi.nlm.nih.gov/pmc/articles/PMC4270169/#B34]]
  - Nagel O, Bonas U. 2018. The Xanthomonas effector protein XopI suppresses the stomatal immunity of tomato. Poster. 6th Xanthomonas Genomics Conference & 2nd Annual EuroXanth Conference. [[https://euroxanth.eu/wp-content/uploads/2018/07/EuroXanth_Second-Annual-Conference-Abstract-Book.pdf|https:<nowiki>//</nowiki>euroxanth.eu/wp-content/uploads/2018/07/EuroXanth_Second-Annual-Conference-Abstract-Book.pdf]]

xopj1

  - Noël L, Thieme F, Nennstiel D, Bonas U (2001). cDNA-AFLP analysis unravels a genome-wide //hrpG//-regulon in the plant pathogen //Xanthomonas campestris//  pv. //vesicatoria//. Mol. Microbiol. 41(6): 1271-1281. doi: [[https://doi.org/10.1046/j.1365-2958.2001.02567.x|10.1046/j.1365-2958.2001.02567.x]].
  - Noël L, Thieme F, Gäbler J, Büttner D, Bonas U (2003). XopC and XopJ, two novel type III effector proteins from //Xanthomonas campestris//  pv. //vesicatoria//. J. Bacteriol. 185(24): 7092-7102. doi: [[https://doi.org/10.1128/JB.185.24.7092-7102.2003|10.1128/JB.185.24.7092-7102.2003]].
  - Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from //Xanthomonas campestris//  pv. //vesicatoria//  trigger plant reactions dependent on a conserved N-myristoylation motif. Mol. Plant-Microbe Interact. 20(10): 1250-1261. doi: [[https://doi.org/10.1094/MPMI-20-10-1250|10.1094/MPMI-20-10-1250]].
  - Bartetzko V, Sonnewald S, Vogel F, Hartner K, Stadler R, Hammes UZ, Börnke F (2009). The //Xanthomonas campestris//  pv. //vesicatoria//  type III effector protein XopJ inhibits protein secretion: evidence for interference with the cell wall-associated defense responses. Mol. Plant-Microbe Interact. 22(6): 655-664. doi: [[https://doi.org/10.1094/MPMI-22-6-0655|10.1094/MPMI-22-6-0655]].
  - Üstün S, Bartetzko V, Börnke F (2013). The //Xanthomonas campestris//  type III effector XopJ targets the host cell proteasome to suppress salicylic-acid mediated plant defence. PLoS Pathog. 9(6): e1003427. doi: [[https://doi.org/10.1371/journal.ppat.1003427|10.1371/journal.ppat.1003427]].
  - Üstün S, Börnke F (2015). The //Xanthomonas campestris//  type III effector XopJ proteolytically degrades proteasome subunit RPT6. Plant Physiol. 168: 107-119. doi: [[https://doi.org/10.1104/pp.15.00132|10.1104/pp.15.00132]].
  - Üstün S, Bartetzko V, Börnke F (2015). The //Xanthomonas//  effector XopJ triggers a conditional hypersensitive response upon treatment of //N. benthamiana//  leaves with salicylic acid. Front. Plant Sci. 6: 599. doi: [[https://doi.org/10.3389/fpls.2015.00599|10.3389/fpls.2015.00599]].
  - White F, Potnis N, Jones JB, Koebnik R (2009) The type III effectors of //Xanthomonas//. Mol. Plant Pathol. 10(6): 749-766. doi: [[https://doi.org/10.1111/J.1364-3703.2009.00590.X|10.1111/J.1364-3703.2009.00590.X]].
  - Üstün S, Börnke F (2014). Interactions of //Xanthomonas//  type-III effector proteins with the plant ubiquitin and ubiquitin-like pathways. Front. Plant Sci. 5: 736. doi: [[https://doi.org/10.3389/fpls.2014.00736|10.3389/fpls.2014.00736]].
  - Scheibner F, Hartmann N, Hausner J, Lorenz C, Hoffmeister A-K, Büttner D (2018). The type III secretion chaperone HpaB controls the translocation of effector and noneffector proteins from //Xanthomonas campestris//  pv. //vesicatoria//. Mol. Plant-Pathogen Interact. 31(1): 61-74. doi: [[https://doi.org/10.1094/MPMI-06-17-0138-R|10.1094/MPMI-06-17-0138-R]].

xopj2

  - Minsavage GV, Dahlbeck D, Whalen MC, Kearny B, Bonas U, Staskawicz BJ, Stall RE (1990). Gene-for-gene relationships specifying disease resistance in //Xanthomonas campestris//  pv. //vesicatoria//-pepper interactions. Mol. Plant Microbe Interact. 3: 41–47.
  - Ciesiolka LD, Hwin T, Gearlds JD, Minsavage GV, Saenz R, Bravo M, Handley V, Conover SM, ZhangH, Caporgno J, Phengrasamy NB, Toms AO, Stall RE, Whalen MC (1999). Regulation of expression of avirulence gene //avrRxv//  and identification of a family of host interaction factors by sequence analysis of //avrBsT//. //Mol. Plant Microbe Interact.//  12, 35–44. doi: 10.1094/MPMI.1999.12.1.35
  - Orth K, Xu ZH, Mudgett MB, Bao ZQ, Palmer LE, Bliska JB, Mangel WF, Staskawicz B, Dixon JE (2000). Disruption of signaling by //Yersinia//  effector YopJ, a ubiquitin-like protein protease. Science 290(5496):1594–1597. doi: 10.1126/science.290.5496.1594
  - Escolar L, Van Den Ackerveken G, Pieplow S, Rossier O, Bonas U (2001). Type III secretion and //in planta//  recognition of the //Xanthomonas//  avirulence proteins AvrBs1 and AvrBsT. Mol. Plant Pathol. 2(5):287-96. doi: 10.1046/j.1464-6722.2001.00077.x.
  - Cunnac S, Wilson A, Nuwer J, Kirik A, Baranage G, Mudgett MB (2007). A conserved carboxylesterase is a suppressor of AvrBsT-elicited resistance in //Arabidopsis//. Plant Cell 19: 688–705.
  - Kirik A, Mudgett MB (2009) SOBER1 phospholipase activity suppresses phosphatidic acid accumulation and plant immunity in response to bacterial effector AvrBsT. Proc. Natl. Acad. Sci. U.S.A. 106: 20532–20537.
  - Kim NH, Choi HW, Hwang BK (2010). //Xanthomonas campestris//  pv. //vesicatoria//  effector AvrBsT induces cell death in pepper, but suppresses defense responses in tomato. Mol. Plant Microbe Interact. 23(8):1069–1082. doi: 10.1094/MPMI-23-8-1069.
  - Szczesny R, Büttner D, Escolar L, Schulze S, Seiferth A, Bonas U (2010). Suppression of the AvrBs1-specific hypersensitive response by the YopJ effector homolog AvrBsT from //Xanthomonas//  depends on a SNF1-related kinase. New Phytol. 187:1058–1074. http:<nowiki>//</nowiki>dx.doi.org/10.1111/j.1469-8137.2010.03346.x.
  - Hwang IS, Kim NH, Choi DS, Hwang BK (2012). Overexpression of //Xanthomonas campestris//  pv. //vesicatoria//  effector AvrBsTin //Arabidopsis//  triggers plant cell death, disease and defense responses. Planta 236(4): 1191–1204.
  - Cheong MS, Kirik A, Kim JG, Frame K, Kirik V, Mudgett MB (2014). AvrBsT acetylates //Arabidopsis//  ACIP1, a protein that associates with microtubules and is required for immunity. PLoS Pathog. 10(2):e1003952. doi: 10.1371/journal.ppat.1003952
  - Kim NH, Kim DS, Chung EH, Hwang BK (2014). Pepper suppressor of the G2 allele of //skp1//  interacts with the receptor-like cytoplasmic kinase1 and type III effector AvrBsT and promotes the hypersensitive cell death response in a phosphorylation-dependent manner. Plant Physiol. 165(1):76-91. doi: 10.1104/pp.114.238840.
  - Kim NH, Hwang BK (2015a). Pepper heat shock protein 70a interacts with the type III effector AvrBsT and triggers plant cell death and immunity. Plant Physiol. 167(2):307-22. doi: 10.1104/pp.114.253898.
  - Kim NH, Hwang BK (2015b). Pepper aldehyde dehydrogenase CaALDH1 interacts with //Xanthomonas//  effector AvrBsT and promotes effector-triggered cell death and defence responses. J. Exp. Bot. 66(11):3367-80. doi: 10.1093/jxb/erv147.
  - Schwartz AR, Potnis N, Timilsina S, Wilson M, Patané J, Martins J Jr, Minsavage GV, Dahlbeck D, Akhunova A, Almeida N, Vallad GE, Barak JD, White FF, Miller SA, Ritchie D, Goss E, Bart RS, Setubal JC, Jones JB, Staskawicz BJ (2015). Phylogenomics of //Xanthomonas//  field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity. Front. Microbiol. 6:535. doi: 10.3389/fmicb.2015.00535
  - Abrahamian P, Timilsina S, Minsavage GV, Kc S, Goss EM, Jones JB, Vallad GE (2018). The type III effector AvrBsT enhances //Xanthomonas perforans//  fitness in field-grown tomato. Phytopathology 108(12):1355-1362. doi: 10.1094/PHYTO-02-18-0052-R.
  - Prochaska H, Thieme S, Daum S, Grau J, Schmidtke C, Hallensleben M, John P, Bacia K, Bonas U (2018). A conserved motif promotes HpaB-regulated export of type III effectors from //Xanthomonas//. Mol. Plant Pathol. 19(11):2473-2487. doi: 10.1111/mpp.12725.

xopj4

  - Astua‐Monge, G., Minsavage, G.V., Stall, R.E., Vallejos, C.E., Davis, M.J. and Jones, J.B. ( 2000) //Xv4//  ‐//avrXv4://  a new gene‐for‐gene interaction identified between //Xanthomonas campestris//  pv. //vesicatoria//race T3 and wild tomato relative //Lycopersicon pennellii//. //Mol. Plant–Microbe Interact//. 13, 1346– 1355.
  - Roden, J., Eardley, L., Hotson, A., Cao, Y. and Mudgett, M.B. ( 2004b) Characterization of the Xanthomonas AvrXv4 effector, a SUMO protease translocated into plant cells. Mol. Plant–Microbe. Interact. 17, 633– 643.
  - Lavie, M, Shillington, E., Eguiluz, C., Grimsley, N., Boucher, C. (2002) PopP1, a new member of the YopJ/AvrRxv family of type III effector proteins, acts as a host-specificity factor and modulates aggressiveness of //Ralstonia solanacearum//. Mol. Plant-Microbe Interact. 15:1058– 68.
  - Timilsina, S., Abrahamian, P., Potnis, N., Minsavage, G.V., White, F.F., Staskawicz, B.J., Jones, J.B., Vallad, G.E., Goss, E.M. (2016) Analysis of sequenced genomes of //Xanthomonas perforans//  identifies candidate targets for resistance breeding in tomato. Phytopathology 106: 1097–1104.

xopj5

  - Wang S, Fang A, Liu L, et al. The type III effector AvrXccB in Xanthomonas campestris pv. campestris targets putative methyltransferases and suppresses innate immunity in Arabidopsis. //Mol Plant Pathol//. 2016;18(6):768-782. doi:10.1111/mpp.124352. da Silva ACR, Ferro JA, Reinach FC, et al. Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. //Nature//. 2002;417(6887):459-463. doi:10.1038/417459a3. Jiang W, Jiang B-L, Xu R-Q, et al. Identification of Six Type III Effector Genes with the PIP Box in Xanthomonas campestris pv. campestris and Five of Them Contribute Individually to Full Pathogenicity. //Mol Plant-Microbe Interact//. 2009;22(11):1401-1411. doi:10.1094/mpmi-22-11-14014. Rongqi X, Xianzhen L, Hongyu W, et al. Regulation of eight avr by hrpG and hrpX in Xanthomonas campestris pv. campestris and their role in pathogenicity. //Prog Nat Sci//. 2006;16(12):1288-1294. doi:10.1080/100200706123301435. Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U. New Type III Effectors from Xanthomonas campestris pv. vesicatoria Trigger Plant Reactions Dependent on a Conserved N-Myristoylation Motif. //Mol Plant-Microbe Interact//. 2007;20(10):1250-1261. doi:10.1094/mpmi-20-10-1250

xopk

  - Qin J, Zhou X, Sun L, Wang K, Yang F, Liao H, Rong W, Yin J, Chen H, Chen X, Zhang J (2018). The //Xanthomonas//  effector XopK harbours E3 ubiquitin-ligase activity that is required for virulence. New Phytol. 220: 219–231. doi: [[https://doi.org/10.1111/nph.15287|10.1111/nph.15287]].
  - Song C, Yang B (2010). Mutagenesis of 18 type III effectors reveals virulence function of XopZ (PXO99) in //Xanthomonas oryzae//  pv. oryzae. Mol. Plant–Microbe Interact. 23: 893–902. doi: [[https://doi.org/10.1094/MPMI-23-7-0893|10.1094/MPMI-23-7-0893]].
  - Mutka AM, Fentress SJ, Sher SW, Berry JC, Pretz C, Nusinow DA, Bart R (2016). Quantitative, Image-Based Phenotyping Methods Provide Insight into Spatial and Temporal Dimensions of Plant Disease. Plant Physiol. 172: 650–660. doi: [[https://doi.org/10.1104/pp.16.00984|10.1104/pp.16.00984]].
  - Schulze S, Kay S, Büttner D, Egler M, Eschen-Lippold L, Hause G, Krüger A, Lee J, Müller O, Scheel D, Szczesny R, Thieme F, Bonas U (2012). Analysis of new type III effectors from //Xanthomonas//  uncovers XopB and XopS as suppressors of plant immunity. New Phytol. 195: 894–911. doi: [[https://doi.org/10.1111/j.1469-8137.2012.04210.x|10.1111/j.1469-8137.2012.04210.x]].
  - Furutani A, Nakayama T, Ochiai H, Kaku H, Kubo Y, Tsuge S (2006). Identification of novel HrpXo regulons preceded by two cis-acting elements, a plant-inducible promoter box and a -10 box-like sequence, from the genome database of //Xanthomonas oryzae//  pv. oryzae. FEMS Microbiol. Lett. 259: 133–141. doi: [[https://doi.org/10.1111/j.1574-6968.2006.00265.x|10.1111/j.1574-6968.2006.00265.x]]

xopl

  - Singer AU, Schulze S, Skarina T, Xu X, Cui H, et al. (2013) A pathogen type III effector with a novel E3 ubiquitin ligase architecture. PLOS Pathogens 9(1): e1003121.[[https://doi.org/10.1371/journal.ppat.1003121|https://doi.org/10.1371/journal.ppat.1003121]]
  - Xia Yan, Jun Tao, Hong-Li Luo, Lei-Tao Tan, Wei Rong, Hui-Ping Li, Chao-Zu He (2019) A type III effector XopLXcc8004 is vital for Xanthomonas campestris pathovar campestris to regulate plant immunity. Research in Microbiology, Volume 170, Issue 3: 138-146,
  - Jiang W, Jiang BL, Xu RQ, Huang JD, Wei HY, Jiang GF, et al. (2009) Identification of six type III effector genes with the PIP Box in Xanthomonas campestris pv campestris and five of them contribute individually to full pathogenicity. Mol Plant-Microbe Interact 22:1401e11.
  - Soni M, Mondal KK. (2017) Xanthomonas axonopodis pv. punicae employs XopL effector to suppress pomegranate immunity. J Integr Plant Biol;29. https:<nowiki>//</nowiki>doi.org/10.1111/jipb.12615.
  - Georgy Popov, Malou Fraiture, Frederic Brunner, and Guido Sessa (2016), Multiple //Xanthomonas euvesicatoria//  Type III effectors inhibit flg22-triggered immunity. Molecular Plant-Microbe Interactions 29:8, 651-660
  - Erickson, J. L., Adlung, N., Lampe, C., Bonas, U. and Schattat, M. H. (2018), The //Xanthomonas//  effector XopL uncovers the role of microtubules in stromule extension and dynamics in //Nicotiana benthamiana//. Plant J, 93: 856-870. doi:[[https://0-doi-org.pugwash.lib.warwick.ac.uk/10.1111/tpj.13813|10.1111/tpj.13813]]

xopn

  - Roden, J. A., Belt, B., Ross, J. B., Tachibana, T., Vargas, J., & Mudgett, M. B. (2004). A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection. Proceedings of the National Academy of Sciences of the United States of America, 101(47), 16624-16629. doi: [[https://doi.org/10.1073/pnas.0407383101|https:<nowiki>//</nowiki>doi.org/10.1073/pnas.0407383101]]
  - Cheong, H., Kim, C. Y., Jeon, J. S., Lee, B. M., Sun Moon, J., & Hwang, I. (2013). Xanthomonas oryzae pv. oryzae type III effector XopN targets OsVOZ2 and a putative thiamine synthase as a virulence factor in rice. PloS one, 8(9), e73346. doi:10.1371/journal.pone.0073346
  - Jiang, B., He, Y., Cen, W., Wei, H., Jiang, G., Jiang, W., Hang, X., Feng, J., Lu, G., Tang, D., & Tang, J. (2008). The type III secretion effector XopXccN of Xanthomonas campestris pv. campestris is required for full virulence. Research in microbiology, 159 3, 216-20 .doi: [[https://doi.org/10.1016/j.resmic.2007.12.004|https:<nowiki>//</nowiki>doi.org/10.1016/j.resmic.2007.12.004]]
  - Kim, J. G., Li, X., Roden, J. A., Taylor, K. W., Aakre, C. D., Su, B., Landone, S., Kirik, A., Chen, Y., Baranage, G.,Martin, B. G., Mudgett B. M., McLane, H. (2009). Xanthomonas T3S effector XopN suppresses PAMP-triggered immunity and interacts with a tomato atypical receptor-like kinase and TFT1. The Plant Cell, 21(4), 1305-1323. doi: 10.1105/tpc.108.063123

xopo

  - Roden, J. A. //et al.//  A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection. //Proc Natl Acad Sci U S A//**101**, 16624-16629, doi:10.1073/pnas.0407383101 (2004).
  - Koebnik, R., Kruger, A., Thieme, F., Urban, A. & Bonas, U. Specific binding of the Xanthomonas campestris pv. vesicatoria AraC-type transcriptional activator HrpX to plant-inducible promoter boxes. //J Bacteriol//**188**, 7652-7660, doi:10.1128/JB.00795-06 (2006).
  - Teper, D., Sunitha, S., Martin, G. B. & Sessa, G. Five Xanthomonas type III effectors suppress cell death induced by components of immunity-associated MAP kinase cascades. //Plant Signal Behav//**10**, e1064573, doi:10.1080/15592324.2015.1064573 (2015)
  - Hajri, A. //et al.//  Multilocus sequence analysis and type III effector repertoire mining provide new insights into the evolutionary history and virulence of //Xanthomonas oryzae//. //Mol Plant Pathol//**13**, 288-302, doi:10.1111/j.1364-3703.2011.00745.x (2012).
  - Popov, G., Fraiture, M., Brunner, F. & Sessa, G. Multiple //Xanthomonas euvesicatoria//  Type III Effectors Inhibit flg22-Triggered Immunity. //Mol Plant Microbe Interact//**29**, 651-660, doi:10.1094/MPMI-07-16-0137-R (2016).
  - Barak, J. D. //et al.//  Whole-Genome Sequences of //Xanthomonas euvesicatoria//  Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors. //Front Plant Sci//**7**, 1805, doi:10.3389/fpls.2016.01805 (2016).
  - Dubrow, Z. //et al.//  Tomato 14-3-3 Proteins Are Required for Xv3 Disease Resistance and Interact with a Subset of //Xanthomonas euvesicatoria//  Effectors. //Mol Plant Microbe Interact//**31**, 1301-1311, doi:10.1094/MPMI-02-18-0048-R (2018).

xopp

  - Roden, J-A., Belt, B., Ross J. B., Tachibana, Th., Vargas, J., Mudgett, M. B. (2004). A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection. PNAS, 101(47):16624-16629. doi􏰅10.1073􏰅pnas.0407383101
  - Ishikawa K., Yamaguchi K., Sakamoto K., Yoshimura S., Inoue K., Tsuge S., et al. (2014). Bacterial effector modulation of host E3 ligase activity suppresses PAMP-triggered immunity in rice. //Nat. Commun.//  5:5430 doi: 10.1038/ncomms6430
  - Furutani, A., Takaoka, M., Sanada, H., Noguchi Y., Oku, T., Tsuno, K., Ochiai, H., Tsuge, S. (2009). //Identification of novel type III secretion effectors in Xanthomonas oryzae pv. oryzae//. //Mol. Plant Microbe Interact.//**22**, 96–106 (2009). doi:10.1094 / MPMI -22-1-0096

xopq

  - [[http://www.frontiersin.org/people/u/367287|Adlung]] N, [[http://www.frontiersin.org/people/u/381169|Prochaska]] H, Thieme S, Banik A, Blüher D, John P, [[http://www.frontiersin.org/people/u/387075|Nagel]] O, [[http://www.frontiersin.org/people/u/380946|Schulze]] S, Gantner J, [[http://www.frontiersin.org/people/u/379482|Delker]] C, [[http://www.frontiersin.org/people/u/387073|Stuttmann]] J and Bonas U. (2016) Non-host Resistance Induced by the Xanthomonas Effector XopQ Is Widespread within the Genus Nicotiana and Functionally Depends on EDS1. Plant Sci., [[https://doi.org/10.3389/fpls.2016.01796|https://doi.org/10.3389/fpls.2016.01796]]
  - [[https://scholar.google.com/citations?user=id31JsoAAAAJ&hl=fr&oi=sra|Adlung]] N, Bonas U (2017) Dissecting virulence function from recognition: cell death suppression in //Nicotiana benthamiana//  by XopQ/HopQ1‐family effectors relies on EDS1‐dependent immunity. The Plant Journal - Wiley Online Library[[https://onlinelibrary.wiley.com/action/doSearch?ContribAuthorStored=Adlung%2C+Norman|Norman Adlung]].
  - [[https://scholar.google.com/citations?user=WjoEi9kAAAAJ&hl=fr&oi=sra|Büttner]] D, Bonas U (2010) Regulation and secretion of //Xanthomonas//  virulence factors. FEMS Microbiology Reviews, Volume 34, Issue 2, March 2010, Pages 107–133, [[https://doi.org/10.1111/j.1574-6976.2009.00192.x|https://doi.org/10.1111/j.1574-6976.2009.00192.x]]
  - [[https://www.ncbi.nlm.nih.gov/pubmed/?term=Deb%20S%5BAuthor%5D&cauthor=true&cauthor_uid=31094082|Deb S]], [[https://www.ncbi.nlm.nih.gov/pubmed/?term=Gupta%20MK%5BAuthor%5D&cauthor=true&cauthor_uid=31094082|Gupta MK]], [[https://www.ncbi.nlm.nih.gov/pubmed/?term=Patel%20HK%5BAuthor%5D&cauthor=true&cauthor_uid=31094082|Patel HK]], [[https://www.ncbi.nlm.nih.gov/pubmed/?term=Sonti%20RV%5BAuthor%5D&cauthor=true&cauthor_uid=31094082|Sonti RV]]. (2019). //Xanthomonas oryzae//  pv. //oryzae//  XopQ protein suppresses rice immune responses through interaction with two 14-3-3 proteins but its phospho-null mutant induces rice immune responses and interacts with another 14-3-3 protein. [[https://www.ncbi.nlm.nih.gov/pubmed/31094082|Mol Plant Pathol.]] 20(7):976-989. doi: 10.1111/mpp.12807.
  - Furutani A,Takaoka M, Sanada H, Noguchi Y, Oku T, Tsuno K, Ochiai H, Tsuge S (2009) Identification of Novel Type III Secretion Effectors in //Xanthomonas oryzae//  pv. //oryzae.//  MPMI Vol. 22, No. 1, 2009, pp. 96–106. doi:10.1094/MPMI -22-1-0096
  - Hajri A, Brin C, Hunault G, Lardeux F, Lemaire C, et al. (2009) Correction: A «Repertoire for Repertoire» Hypothesis: Repertoires of Type Three Effectors are Candidate Determinants of Host Specificity in //Xanthomonas//. PLOS ONE 4(10): 10.1371/annotation/92d243d0-22b2-44da-9618-83b4aa252724
  - Jiang W//,//  Jiang B//,//  Xu R//,//  Huang J//,//  Wei H//,//  Jiang GF//,//  Cen WJ//,//  Liu J//,//  Ge YY//,//  Li GH//,//  Su LL//,//  Hang XH//,//  Tang DJ//,//  Lu GT//,//  Feng JX//,//  He YQ//,//  Tang JL//.(2009)//  Identification of six type III effector genes with the PIP box in //Xanthomonas campestris//  pv. //campestris//  and five of them contribute individually to full pathogenicity//. Mol Plant–Microbe Interact//  2009//;//**22**//://1401//–//1411//.//
  - Roden JA, Belt B, Ross JB, Tachibana T, Vargas J et al. (2004) A genetic screen to isolate type III effectors translocated into pepper cells during //Xanthomonas//  infection. Proc Natl Acad Sci U S A 101: 16624-16629. doi:[[https://doi.org/10.1073/pnas.0407383101|https://doi.org/10.1073/pnas.0407383101]]
  - Sinha D, Gupta MK, Patel HK, Ranjan A, Sonti RV. 2014. Cell Wall Degrading Enzyme Induced Rice Innate Immune Responses Are Suppressed by the Type 3 Secretion System Effectors XopN, XopQ, XopX and XopZ of //Xanthomonas oryzae//  pv. //oryzae//. 2013 PLoS ONE 8(9): e75867. [[https://doi.org/10.1371/journal.pone.0075867|https:<nowiki>//</nowiki>doi.org/10.1371/journal.pone.0075867]]
  - Teper D, SalomonD, Sunitha S, Kim JG, Mudgett MB, Sessa G. (2014). //Xanthomonas euvesicatoria//  type III effectorXopQ interactswith tomato and pepper 14-3-3 isoforms to suppress effector-triggered immunity. Plant J. 77:297–309
  - Yu S, Hwang I, Rhee S. (2014) The crystal structure of type III effector protein XopQ from //Xanthomonas oryzae//  complexed with adenosine diphosphate ribose. Proteins [[https://doi.org/10.1002/prot.24656|https://doi.org/10.1002/prot.24656]]

xopr

  - Furutani, A., et al., //Identification of novel HrpXo regulons preceded by two cis-acting elements, a plant-inducible promoter box and a −10 box-like sequence, from the genome database of Xanthomonas oryzae pv. oryzae.//  FEMS Microbiol Lett, 2006. **259**  (1): p. 133-141 DOI:10.1111/j.1574-6968.2006.00265.x
  - Furutani, A., et al., //Identification of Novel Type III Secretion Effectors in Xanthomonas oryzae pv. oryzae.//  Molecular Plant-Microbe Interactions, 2009. **22**  (1): p. 96-106 DOI:10.1094/mpmi-22-1-0096
  - WHITE, F.F., et al., //The type III effectors of Xanthomonas.//  Mol Plant Pathol, 2009. **10**  (6): p. 749-766 DOI:10.1111/j.1364-3703.2009.00590.x
  - Verma, G., et al., //XopR T3SS-effector of Xanthomonas oryzae pv. oryzae suppresses cell death-mediated plant defense response during bacterial blight development in rice.//  3 Biotech, 2019. **9**  (7): p. 272 DOI:10.1007/s13205-019-1802-9
  - Kametani-Ikawa, Y., et al., //An H-NS-like protein involved in the negative regulation of hrp genes in Xanthomonas oryzae pv. oryzae.//  FEMS Microbiol Lett, 2011. **319**  (1): p. 58-64 DOI:10.1111/j.1574-6968.2011.02266.x
  - Akimoto-Tomiyama, C., et al., //XopR, a Type III Effector Secreted by Xanthomonas oryzae pv. oryzae, Suppresses Microbe-Associated Molecular Pattern-Triggered Immunity in Arabidopsis thaliana.//  Molecular Plant-Microbe Interactions, 2012. **25**  (4): p. 505-514 DOI:10.1094/mpmi-06-11-0167
  - Medina, C.A., et al., //The role of type III effectors from Xanthomonas axonopodis pv. manihotis in virulence and suppression of plant immunity.//  Mol Plant Pathol, 2018. **19**  (3): p. 593-606 DOI:10.1111/mpp.12545
  - Verma, G., M. Sharma, and K.K. Mondal, //XopR TTSS-effector regulates <i>in planta</i> growth, virulence of Indian strain of <i>Xanthomonas oryzae</i> pv. <i>oryzae</i> via suppressing reactive oxygen species production and cell wall-associated rice immune responses during blight induction.//  Functional Plant Biology, 2018. **45**  (5): p. 561-574 DOI:https:<nowiki>//</nowiki>doi.org/10.1071/FP17147
  - Wang, S., et al., //A Xanthomonas oryzae pv. oryzae effector, XopR, associates with receptor-like cytoplasmic kinases and suppresses PAMP-triggered stomatal closure.//  Science China Life Sciences, 2016. **59**  (9): p. 897-905 DOI:10.1007/s11427-016-5106-6

xops

  - Schulze S, Kay S, Büttner D, Egler M, Eschen-Lippold L, Hause G, Krüger A, Lee J, Müller O, Scheel D, Szczesny R, Thieme F, Bonas U (2012). Analysis of new type III effectors from //Xanthomonas//  uncovers XopB and XopS as suppressors of plant immunity. New Phytol. 195(4): 894-911. doi: [[https://doi.org/10.1111/j.1469-8137.2012.04210.x|10.1111/j.1469-8137.2012.04210.x]].
  - Barak, J.G., Vancheva, T, Lefeuvre, P., Jones, J. B., Timilsina, S., Minsavage, G.V, Vallad, G.E. and Koebnik, R Whole-Genome Sequences of Xanthomonas euvesicatoria Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors FEMS Microbiol. Lett. 360(2): 113-116. doi: [[https://doi.org/10.1111/1574-6968.12607|10.1111/1574-6968.12607]].

xopx

  - Lindeberg, M., Cunnac, S., Collmer, A. (2012) //Pseudomonas////syringae//  type III effector repertoires: last words in endless arguments. Trends Microbiol. 20, 199–208, Doi: 10.1016/j.tim.2012.01.003.
  - Metz, M., Dahlbeck, D., Morales, C.Q., Sady, B.A., Clark, E.T., Staskawicz, B.J. (2005) The conserved //Xanthomonas////campestris//  pv. //vesicatoria//  effector protein XopX is a virulence factor and suppresses host defense in //Nicotiana////benthamiana//: XopX effector protein suppresses plant host defense. Plant J. 41, 801–14, Doi: 10.1111/j.1365-313X.2005.02338.x.
  - Salomon, D., Dar, D., Sreeramulu, S., Sessa, G. (2011) Expression of //Xanthomonas////campestris//  pv. //vesicatoria//  type III effectors in yeast affects cell growth and viability. Mol. Plant. Microbe Interact. 24, 305–14, Doi: 10.1094/MPMI-09-10-0196.
  - Sinha, D., Gupta, M.K., Patel, H.K., Ranjan, A., Sonti, R.V. (2013) Cell wall degrading enzyme induced rice innate immune responses are suppressed by the type 3 secretion system effectors XopN, XopQ, XopX and XopZ of //Xanthomonas////oryzae//  pv. //oryzae//. PLOS ONE 8, e75867, Doi: 10.1371/journal.pone.0075867.
  - Stork, W., Kim, J.-G., Mudgett, M.B. (2015) Functional analysis of plant defense suppression and activation by the //Xanthomonas//  core type III effector XopX. Mol. Plant. Microbe Interact. 28, 180–94, Doi: 10.1094/MPMI-09-14-0263-R.

xopy

  - Bogdanove AJ, Koebnik R, Lu H, Furutani A, Angiuoli SV, Patil PB, Van Sluys MA, Ryan RP, Meyer DF, Han SW, Aparna G, Rajaram M, Delcher AL, Phillippy AM, Puiu D, Schatz MC, Shumway M, Sommer DD, Trapnell C, Benahmed F, Dimitrov G, Madupu R, Radune D, Sullivan S, Jha G, Ishihara H, Lee SW, Pandey A, Sharma V, Sriariyanun M, Szurek B, Vera-Cruz CM, Dorman KS, Ronald PC, Verdier V, Dow JM, Sonti RV, Tsuge S, Brendel VP, Rabinowicz PD, Leach JE, White FF, Salzberg SL (2011). Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic //Xanthomonas//  spp. //J Bacteriol//. 193(19): 5450-5464. doi: 10.1128/JB.05262-11
  - Falahi Charkhabi N, Booher NJ, Peng Z, Wang L, Rahimian H, Shams-Bakhsh M, Liu Z, Liu S, White FF, Bogdanove AJ (2017). Complete genome sequencing and targeted mutagenesis reveal virulence contributions of Tal2 and Tal4b of //Xanthomonas translucens//  pv. undulosa ICMP11055 in bacterial leaf streak of wheat. //Front Microbiol//. 8:1488. doi: 10.3389/fmicb
  - Yamaguchi K, Nakamura Y, Ishikawa K, Yoshimura Y, Tsuge S, Kawasaki T (2013). Suppression of rice immunity by //Xanthomonas oryzae//  type III effector Xoo2875. Biosci. Biotechnol. Biochem//.//  77(4): 796–801. doi:10.1271/bbb.120929.
  - Yamaguchi K, Yamada K, Ishikawa K, Yoshimura S, Hayashi N, Uchihashi K, Ishihama N, Kishi-Kaboshi M, Takahashi A, Tsuge S, Ochiai H, Tada Y, Shimamoto K, Yoshioka H, Kawasaki T (2013). A receptor-like cytoplasmic kinase targeted by a plant pathogen effector is directly phosphorylated by the chitin receptor and mediates rice immunity. Cell Host Microbe 13(3):347–357//.//  doi: 10.1016/j.chom.2013.02.007.
  - White FF, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of //Xanthomonas//. Mol Plant Pathol 10(6):749–766. doi: 10.1111/j.1364-3703.2009.00590.x.

xopz

  - Ryan RP, Koebnik R, Szurek B, Boureau T, Bernal A, Bogdanove A, Dow JM (2009) Passing GO (gene ontology) in plant pathogen biology: a report from the //Xanthomonas//  Genomics Conference. Cellular Microbiology 11: 1689–1696
  - Sinha D, Gupta MK, Patel HK, Ranjan A, Sonti RV (2013) Cell Wall Degrading Enzyme Induced Rice Innate Immune Responses Are Suppressed by the Type 3 Secretion System Effectors XopN, XopQ, XopX and XopZ of Xanthomonas oryzae pv. oryzae. PLoS ONE 8: e75867
  - Song C, Yang B (2010) Mutagenesis of 18 Type III Effectors Reveals Virulence Function of XopZ <sub>PXO99</sub>  in //Xanthomonas oryzae//  pv. //oryzae//. MPMI 23: 893–902
  - Zhou H, Yang B (2018) Non-TAL Effectors From Xanthomonas oryzae pv. oryzae Suppress Peptidoglycan-Triggered MAPK Activation in Rice. Frontiers in Plant Science 9: 9
  - Zhou J Host target genes of the Xanthomonas oryzae pv. oryzae type III effectors for bacterial blight in rice. 193

banana

  - Tripathi L, Tripathi JN, Shah T, Muiruri KS, Katari M: Molecular Basis of Disease Resistance in Banana Progenitor Musa balbisiana against Xanthomonas campestris pv. musacearum. //Scientific reports//  2019, 9(1):7007.
  - D’Hont A, Denoeud F, Aury J-M, Baurens F-C, Carreel F, Garsmeur O, Noel B, Bocs S, Droc G, Rouard M: The banana (Musa acuminata) genome and the evolution of monocotyledonous plants. //Nature//  2012, 488(7410):213.
  - Chen C-h, Lin H-j, Ger M-j, Chow D, Feng T-y: cDNA cloning and characterization of a plant protein that may be associated with the harpinPSS-mediated hypersensitive response. //Plant molecular biology//  2000, 43(4):429-438.
  - Qin C, Yu C, Shen Y, Fang X, Chen L, Min J, Cheng J, Zhao S, Xu M, Luo Y: Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization. //Proceedings of the National Academy of Sciences//  2014, 111(14):5135-5140.4. Tripathi L, Tripathi JN, Kiggundu A, Korie S, Shotkoski F, Tushemereirwe WK: Field trial of Xanthomonas wilt disease-resistant bananas in East Africa. //Nature Biotechnology//  2014, 32(9):868.//Pathogen:////Xanthomonas campestris pv. musacearum//
  - Namukwaya B, Tripathi L, Tripathi J, Arinaitwe G, Mukasa S, Tushemereirwe W: Transgenic banana expressing Pflp gene confers enhanced resistance to Xanthomonas wilt disease. //Transgenic research//  2012, 21(4):855-865.
  - Dayakar BV, Lin H-J, Chen C-H, Ger M-J, Lee B-H, Pai C-H, Chow D, Huang H-E, Hwang S-Y, Chung M-C: Ferredoxin from sweet pepper (Capsicum annuum L.) intensifying harpin pss-mediated hypersensitive response shows an enhanced production of active oxygen species (AOS). //Plant molecular biology//  2003, 51(6):913-924.
  - Qin C, Yu C, Shen Y, Fang X, Chen L, Min J, Cheng J, Zhao S, Xu M, Luo Y: Whole-genome sequencing of cultivated and wild peppers provides insights into Capsicum domestication and specialization. //Proceedings of the National Academy of Sciences//  2014, 111(14):5135-5140.
  - Jin Y, Goodman RE, Tetteh AO, Lu M, Tripathi L: Bioinformatics analysis to assess potential risks of allergenicity and toxicity of HRAP and PFLP proteins in genetically modified bananas resistant to Xanthomonas wilt disease. //Food and Chemical Toxicology//  2017, 109:81-89.
  - Tripathi L, Mwaka H, Tripathi JN, Tushemereirwe WK: Expression of sweet pepper Hrap gene in banana enhances resistance to Xanthomonas campestris pv. musacearum. //Molecular Plant Pathology//  2010, 11(6):721-731.
  - Ssekiwoko F, Kiggundu A, Tushemereirwe W, Karamura E, Kunert K: Xanthomonas vasicola pv. musacearum down-regulates selected defense genes during its interaction with both resistant and susceptible banana. //Physiological and molecular plant pathology//  2015, 90:21-26.
  - Smith J, Jones D, Karamura E, Blomme G, Turyagyenda F: An analysis of the risk from Xanthomonas campestris pv. musacearum to banana cultivation in Eastern, Central and Southern Africa. //Bioversity International, Montpellier, France ISBN//  2008:978-972.
  - Biruma M, Pillay M, Tripathi L, Blomme G, Abele S, Mwangi M, Bandyopadhyay R, Muchunguzi P, Kassim S, Nyine M //et al//: Banana Xanthomonas wilt: A review of the disease, management strategies and future research directions. //African Journal of Biotechnology (ISSN: 1684-5315) Vol 6 Num 8//  2007, 6.
  - Nakato G, Christelová P, Were E, Nyine M, Coutinho TA, Doležel J, Uwimana B, Swennen R, Mahuku G: Sources of resistance in Musa to Xanthomonas campestris pv. musacearum, the causal agent of banana xanthomonas wilt. //Plant pathology//  2019, 68(1):49-59.
  - Endah R, Coutinho T, Chikwamba R: Xanthomonas campestris pv. musacearum induces sequential expression of two NPR-1 like genes in banana. //Aspects of Applied Biology//  2009(96):325-330.

bean

  - Zapata M, Beaver J S, Porch T G (2011). Dominant gene for common bean resistance to common bacterial blight caused by Xanthomonas axonopodis pv. phaseoli. Euphytica, 179(3): 373-382. doi: 10.1007/s10681-010-0313-x.
  - Singh S P, Miklas P N (2015). Breeding common bean for resistance to common blight: A review. Crop Science, 55(3): 971-984. doi: 10.2135/cropsci2014.07.0502.

cassava

  - Cohn, M., Bart, R.S., Shybut, M. et al. Molecular Plant-Microbe Interactions (2014) 27: 1186-1198
  - Cohn, M., Morbitzer, R., Lahaye, T., Staskawicz, J. Molecular Plant Pathology (2016) 17: 875-889
  - Diaz-Tatis, P.A., Herrera-Corzo, M., Ochoa Cabezas, J.C. et al. Planta (2018) 247: 1031-1042
  - Diaz-Tatis, P.A., Ochoa, J.C., Garcia, L. et al. Tropical Plant Pathology (2019) 44: 225-237
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  - Li, X., Fan, S., Hu, W., et al. Frontiers in Plant Science (2017) https:<nowiki>//</nowiki>doi.org/10.3389/fpls.2017.02110
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citrus

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cotton

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fagales

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mango

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pepper

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populus

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prunus

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reviews

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soybean

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tomato

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wheat

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