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bacteria:t3e:xopz

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bacteria:t3e:xopz [2020/08/02 18:51]
jfpothier 		bacteria:t3e:xopz [2020/08/02 21:49]
jfpothier
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 Family: XopZ\\ Family: XopZ\\
 Prototype: XopZ (//Xanthomonas oryzae// pv. o//ryzae//; strain PXO99<sup>A</sup>  )\\ Prototype: XopZ (//Xanthomonas oryzae// pv. o//ryzae//; strain PXO99<sup>A</sup>  )\\
-RefSeq ID: 1,414 amino-acid protein of unknown function. [[https://www.ncbi.nlm.nih.gov/protein/188521395|ACD59340.1]] and [[https://www.ncbi.nlm.nih.gov/protein/188521179|ACD59124.1]] (PXO99<sup>A </sup>  contains two identical copies of the gene due to a 212 kb duplication in the genome; Song //et al//., 2010).\\+RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/188521179|ACD59124.1 ]](=PXO_01041; the GenBank entry is only 1,371 aa long whereas the initial description mentions 1,414 aa. Moreover, PXO99<sup>A </sup>  contains two identical copies of the gene due to a 212 kb duplication in the genome (Song //et al//., 2010); [[https://www.ncbi.nlm.nih.gov/protein/ACD59315.1|ACD59315.1]] (=PXO_06152) is only 314 aa long in GenBank).\\
 3D structure: Unknown. The N-terminus of XopZ<sub>PXO99</sub>, contains two Nuclear Localization Signals (NLS) signals and several Nuclear Export Signals (NES) (Zhou //et al//., 2015). 3D structure: Unknown. The N-terminus of XopZ<sub>PXO99</sub>, contains two Nuclear Localization Signals (NLS) signals and several Nuclear Export Signals (NES) (Zhou //et al//., 2015).
 ===== Biological function ===== ===== Biological function =====
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 === How discovered? === === How discovered? ===
  
-In 2009, generation of mutants for 18 non-TAL type 3 effector genes allowed to investigate the function of several T3Es in //Xoo// strain PXO99<sup>A</sup> . It was reported on XopZ that it contributes to the full virulence of the strain PXO99<sup>A</sup>  (Ryan //et al//., 2009; Song //et al//., 2010).+In 2009, generation of mutants for 18 non-TAL type 3 effector genes allowed to investigate the function of several T3Es in //Xoo// strain PXO99<sup>A</sup>  . It was reported on XopZ that it contributes to the full virulence of the strain PXO99<sup>A</sup>  (Ryan //et al//., 2009; Song //et al//., 2010).
 === (Experimental) evidence for being a T3E === === (Experimental) evidence for being a T3E ===
  

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