This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision Last revision Both sides next revision | ||
bacteria:t3e:xopd [2020/07/08 17:46] rkoebnik [XopD] |
bacteria:t3e:xopd [2020/07/08 18:25] rkoebnik |
||
---|---|---|---|
Line 6: | Line 6: | ||
Class: XopD (Xanthomonas outer protein D)\\ | Class: XopD (Xanthomonas outer protein D)\\ | ||
- | Family: | + | Family: |
- | Prototype: XopD (// | + | Prototype: XopD (// |
RefSeq ID: [[https:// | RefSeq ID: [[https:// | ||
3D structure: [[https:// | 3D structure: [[https:// | ||
- | |||
===== Biological function ===== | ===== Biological function ===== | ||
Line 18: | Line 17: | ||
=== (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
- | XopD is a desumoylating enzyme with strict specificity for its plant small ubiquitin-like modifier (SUMO) substrates (Chosed //et al//., 2007). C-terminus of XopD (amino acids 322–520) shares primary sequence similarity with the C48 family of cysteine peptidases. In the XopD polypeptide, | + | XopD is a desumoylating enzyme with strict specificity for its plant small ubiquitin-like modifier (SUMO) substrates (Chosed //et al//., 2007). C-terminus of XopD (amino acids 322–520) shares primary sequence similarity with the C48 family of cysteine peptidases |
Besides C-terminal SUMO protease domain (Chosed //et al//., 2007; Hotson //et al//., 2003), XopD has a unique N-terminal region with a host range determining non-specific DNA-binding domain (DBD) (Kim //et al//., 2011) and a central domain with two internal ERF-associated amphiphilic repression (EAR) motifs (L/ | Besides C-terminal SUMO protease domain (Chosed //et al//., 2007; Hotson //et al//., 2003), XopD has a unique N-terminal region with a host range determining non-specific DNA-binding domain (DBD) (Kim //et al//., 2011) and a central domain with two internal ERF-associated amphiphilic repression (EAR) motifs (L/ |