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bacteria:t3e:xope1

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bacteria:t3e:xope1 [2020/07/02 16:33]
rkoebnik [References] 		bacteria:t3e:xope1 [2020/07/08 18:28]
rkoebnik [XopE1]
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 ====== XopE1 ====== ====== XopE1 ======
  
-Author: Jaime Cubero\\ +Author: [[https://www.researchgate.net/profile/Jaime_Cubero|Jaime Cubero]]\\ 
-Internal reviewer: Ralf Koebnik\\+Internal reviewer: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]\\
 Expert reviewer: FIXME Expert reviewer: FIXME
  
 Class: XopE\\ Class: XopE\\
 Family: XopE1\\ Family: XopE1\\
-Prototype: XCV0294 (//Xanthomonas euvesicatoria// pv. //euvesicatoria// aka //Xanthomonas campestris// pv. //vescicatoria//; strain 85-10)\\+Prototype: XCV0294 (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris// pv. //vesicatoria//; strain 85-10)\\
 RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ21925.1|CAJ21925.1]] (400 aa)\\ RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ21925.1|CAJ21925.1]] (400 aa)\\
 Synonym: AvrXacE1 (//Xanthomonas citri// pv. //citri//)\\ Synonym: AvrXacE1 (//Xanthomonas citri// pv. //citri//)\\
-3D structure: Myristoylation motif at their extreme N-terminus (Thieme //et al.//, 2007).+3D structure: Myristoylation motif at their extreme N terminus (Thieme //et al.//, 2007). 
 ===== Biological function ===== ===== Biological function =====
  
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 Using RT-PCR analyses, XopE1 from //X. euvesicatoria// was found to be upregulated by HrpG and HrpX (Thieme //et al//., 2007). The promoter of xopE1<sub>XCV85-10</sub> contains a PIP BOX (Thieme //et al//., 2007). Using RT-PCR analyses, XopE1 from //X. euvesicatoria// was found to be upregulated by HrpG and HrpX (Thieme //et al//., 2007). The promoter of xopE1<sub>XCV85-10</sub> contains a PIP BOX (Thieme //et al//., 2007).
 +
 +Transcriptome analysis (RNA-seq) and qRT-PCR revealed that //avrXacE1// (//xopE1//) gene expression is downregulated in a //X. citri// pv. //citri// Δ//phoP// mutant, indicating that PhoP is a positive regulator of //xopE1// expression (Wei et al., 2019).
 === Phenotypes === === Phenotypes ===
  
bacteria/t3e/xope1.txt · Last modified: 2020/07/08 18:51 by rkoebnik

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