Differences

This shows you the differences between two versions of the page.

--- bacteria:t3e:xope1 [2020/07/01 12:08]
rkoebnik [Biological function]
+++ bacteria:t3e:xope1 [2020/07/08 18:51] (current)
rkoebnik [XopE1]
@@ Line 1: / Line 1: @@
 ====== XopE1 ======
-Author: Jaime Cubero\\
+Author: [[https://www.researchgate.net/profile/Jaime_Cubero|Jaime Cubero]]\\
-Internal reviewer: Ralf Koebnik\\
+Internal reviewer: [[https://www.researchgate.net/profile/Ralf_Koebnik|Ralf Koebnik]]\\
 Expert reviewer: FIXME
 Class: XopE\\
 Family: XopE1\\
-Prototype: XCV0294 (//Xanthomonas euvesicatoria// pv. //euvesicatoria// aka //Xanthomonas campestris// pv. //vescicatoria//; strain 85-10)\\
+Prototype: XCV0294 (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris// pv. //vesicatoria//; strain 85-10)\\
 RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ21925.1|CAJ21925.1]] (400 aa)\\
 Synonym: AvrXacE1 (//Xanthomonas citri// pv. //citri//)\\
-D structure: Myr motif at their extreme N-terminus.
+D structure: Myristoylation motif at the extreme N terminus (Thieme //et al.//, 2007).
 ===== Biological function =====
@@ Line 23: / Line 23: @@
 Using RT-PCR analyses, XopE1 from //X. euvesicatoria// was found to be upregulated by HrpG and HrpX (Thieme //et al//., 2007). The promoter of xopE1<sub>XCV85-10</sub> contains a PIP BOX (Thieme //et al//., 2007).
+Transcriptome analysis (RNA-seq) and qRT-PCR revealed that //avrXacE1// (//xopE1//) gene expression is downregulated in a //X. citri// pv. //citri// Δ//phoP// mutant, indicating that PhoP is a positive regulator of //xopE1// expression (Wei et al., 2019).
 === Phenotypes ===
@@ Line 31: / Line 33: @@
 === Enzymatic function ===
-XopE1 belongs to the HopX effector family, which are part of the transglutaminase superfamily (Nimchuk //et al//., 2007).
+XopE1 belongs to the HopX effector family, members of which belong to the transglutaminase superfamily (Nimchuk //et al//., 2007).
 === Interaction partners ===
-XopE1 was found to physically interact with tomato 14-3-3s (TFT) and is also associated to VirK secreted by T2SS and with a possible role in the modulation of plant immune response during the infection process (Assis //et al//., 2017).
+XopE1 was found to physically interact with tomato 14-3-3s (TFT) (Dubrow //et al.//, 2018). In addition, XopE1 was predicted to interact with VirK, which is secreted by the T2SS and for which a possible role in the modulation of plant immune response during the infection process was suggested (Assis //et al//., 2017).
 ===== Conservation =====
 === In xanthomonads ===
-Yes (//e.g.//, //X. citri, X. campestris, X. phaseoli, X. alfalfa, X. euvesicatoria//).
+Yes (//e.g.//, //X. alfalfa, X. citri, X. euvesicatoria//, //X. phaseoli//).
 === In other plant pathogens/symbionts ===
-Yes (//Pseudomonas//, //Ralstonia//).
+Yes (//Acidovorax// spp., //Pseudomonas// spp., //Ralstonia// //solanacearum//; more distant homologs in rhizobia).
 ===== References =====
@@ Line 61: / Line 62: @@
 Thieme F, Szczesny R, Urban A, Kirchner O, Hause G, Bonas U (2007). New type III effectors from //Xanthomonas campestris// pv. vesicatoria trigger plant reactions dependent on a conserved N-myristoylation motif. Mol. Plant Microbe Interact. 20: 1250-1261. DOI: [[https://doi.org/10.1094/MPMI-20-10-1250|10.1094/MPMI-20-10-1250]]
+Wei C, Ding T, Chang C, Yu C, Li X, Liu Q (2019). Global regulator PhoP is necessary for motility, biofilm formation, exoenzyme production and virulence of //Xanthomonas citri// subsp. //citri// on citrus plants. Genes 10: 340. DOI: [[https://doi.org/10.3390/genes10050340|10.3390/genes10050340]]

EuroXanth DokuWiki

User Tools

Site Tools

Differences

Page Tools