EuroXanth DokuWiki

User Tools

Site Tools

Trace:
bacteria:t3e:xopf

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision 		Previous revision
Last revision Both sides next revision
bacteria:t3e:xopf [2020/08/07 14:44]
kalyanmondal [XopF] 		bacteria:t3e:xopf [2020/09/10 18:29]
rkoebnik [Conservation]
Line 3: Line 3:
 Author: [[https://www.researchgate.net/profile/Leonor_Martins|Leonor Martins]]\\ Author: [[https://www.researchgate.net/profile/Leonor_Martins|Leonor Martins]]\\
 Internal reviewer: [[https://www.researchgate.net/profile/Jaime_Cubero|Jaime Cubero]]\\ Internal reviewer: [[https://www.researchgate.net/profile/Jaime_Cubero|Jaime Cubero]]\\
-Expert reviewer: FIXME+Expert reviewer: [[https://www.researchgate.net/profile/Kalyan_Mondal|Kalyan K Mondal]]
  
 Class: XopF\\ Class: XopF\\
 Family: XopF1, XopF2, XopF3\\ Family: XopF1, XopF2, XopF3\\
 Prototype: XopF (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris //pv. //vesicatoria//; strain 85-10)\\ Prototype: XopF (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris //pv. //vesicatoria//; strain 85-10)\\
-RefSeq ID: XopF1_Xe [[https://www.ncbi.nlm.nih.gov/protein/WP_011346095.1|WP_011346095.1]] (670 aa), XopF1_Xoo [[https://www.ncbi.nlm.nih.gov/protein/589298639|AHK80891]] (661 aa), XopF2 [[https://www.ncbi.nlm.nih.gov/protein/56121735|AAV74205.1]] (667 aa)\\+RefSeq ID: XopF1_Xe [[https://www.ncbi.nlm.nih.gov/protein/WP_011346095.1|WP_011346095.1]] (670 aa), XopF1_Xoo [[https://www.ncbi.nlm.nih.gov/protein/589298639|WP_AHK80891]] (661 aa), XopF2 [[https://www.ncbi.nlm.nih.gov/protein/56121735|AAV74205.1]] (667 aa)\\
 Synonym: Hpa4\\ Synonym: Hpa4\\
 3D structure: Unknown 3D structure: Unknown
Line 52: Line 52:
 === In xanthomonads === === In xanthomonads ===
  
-Yes (//e.g.//, //X. arboricola, X. bromi//, //X. citri, X. oryzae//, //X. euvesicatoria//, //X. translucens//, //X. vasicola//). Since the G+C content of the //xopF1//  gene is similar to that of the //Xcv//  //hrp//  gene cluster, it may be a member of a “core” group of //Xanthomonas//  spp. effectors (Roden et al., 2004). +Yes (//e.g.//, //X. arboricola, X. bromi//, //X. citri, X. oryzae// pv.// oryzae//, //X. euvesicatoria//, //X. translucens//, //X. vasicola//). Since the G+C content of the //xopF1// gene is similar to that of the //Xcv// //hrp// gene cluster, it may be a member of a “core” group of //Xanthomonas// spp. effectors (Roden //et al.//, 2004).
 === In other plant pathogens/symbionts === === In other plant pathogens/symbionts ===
  
bacteria/t3e/xopf.txt · Last modified: 2020/09/10 18:31 by rkoebnik

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki