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bacteria:t3e:xopd [2020/07/08 16:51]
rkoebnik [Further reading] 		bacteria:t3e:xopd [2020/07/08 18:23]
rkoebnik [XopD]
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 Class: XopD (Xanthomonas outer protein D)\\ Class: XopD (Xanthomonas outer protein D)\\
 Family: family C48 (Rawlings //et al//., 2006)\\ Family: family C48 (Rawlings //et al//., 2006)\\
-Prototype: XopD (//Xanthomonas// outer protein D ; //Xanthomonas euvesicatoria// pv. //euvesicatoria// aka //Xanthomonas campestris// pv. //vescicatoria//; strain 85-10)\\+Prototype: XopD (//Xanthomonas euvesicatoria// pv. //euvesicatoria//, ex //Xanthomonas campestris// pv. //vesicatoria//; strain 85-10)\\
 RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ22068|CAJ22068]] (545 aa); [[https://www.ncbi.nlm.nih.gov/protein/DAA34040|DAA34040]] (760 aa) new annotation\\ RefSeq ID: [[https://www.ncbi.nlm.nih.gov/protein/CAJ22068|CAJ22068]] (545 aa); [[https://www.ncbi.nlm.nih.gov/protein/DAA34040|DAA34040]] (760 aa) new annotation\\
 3D structure: [[https://www.rcsb.org/structure/2OIV|2OIV]], [[https://www.rcsb.org/structure/2OIX|2OIX]] (Chosed //et al//., 2007); [[https://www.rcsb.org/structure/5JP1|5JP1]], [[https://www.rcsb.org/structure/5JP3|5JP3]] ( Pruneda //et al.//, 2016 ) 3D structure: [[https://www.rcsb.org/structure/2OIV|2OIV]], [[https://www.rcsb.org/structure/2OIX|2OIX]] (Chosed //et al//., 2007); [[https://www.rcsb.org/structure/5JP1|5JP1]], [[https://www.rcsb.org/structure/5JP3|5JP3]] ( Pruneda //et al.//, 2016 )
 +
 ===== Biological function ===== ===== Biological function =====
  
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 ===== Further reading ===== ===== Further reading =====
  
-Canonne J, Marino D, Noël LD, Arechaga I, Pichereaux C, Rossignol M, Roby D, Rivas S (2010). Detection and functional characterization of a 215 amino acid N-terminal extension in the //Xanthomonas// type III effector XopD. PLoS One 5: e15773. DOI: [[https://doi.org/10.1371/journal.pone.0015773|10.1371/journal.pone.0015773]]. [[https://doi.org/10.1371/journal.pone.0015773.|.]] **Retraction in: PLoS One (2018) 13: e0190773.** DOI: [[https://doi.org/10.1371/journal.pone.0190773|10.1371/journal.pone.0190773 ]]+Canonne J, Marino D, Noël LD, Arechaga I, Pichereaux C, Rossignol M, Roby D, Rivas S (2010). Detection and functional characterization of a 215 amino acid N-terminal extension in the //Xanthomonas// type III effector XopD. PLoS One 5: e15773. DOI: [[https://doi.org/10.1371/journal.pone.0015773|10.1371/journal.pone.0015773]]. **Retraction in: PLoS One (2018) 13: e0190773.** DOI: [[https://doi.org/10.1371/journal.pone.0190773|10.1371/journal.pone.0190773 ]] 
 + 
 +Raffaele S, Rivas S (2013). Regulate and be regulated: integration of defense and other signals by the AtMYB30 transcription factor. Front. Plant Sci. 4: 98. DOI: [[https://doi.org/10.3389/fpls.2013.00098|10.3389/fpls.2013.00098]] 
 + 
 +Tan L, Rong W, Luo H, Chen Y, He C (2014). The //Xanthomonas campestris// effector protein XopD<sub>Xcc8004</sub> triggers plant disease tolerance by targeting DELLA proteins. New Phytol. 204: 595-608. DOI: [[https://doi.org/10.1111/nph.12918|10.1111/nph.12918]]
  

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