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bacteria:t3e:xopf [2020/07/08 17:48] rkoebnik [XopF] |
bacteria:t3e:xopf [2020/08/07 15:10] kalyanmondal [XopF] |
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Author: [[https:// | Author: [[https:// | ||
Internal reviewer: [[https:// | Internal reviewer: [[https:// | ||
- | Expert reviewer: | + | Expert reviewer: |
Class: XopF\\ | Class: XopF\\ | ||
Family: XopF1, XopF2, XopF3\\ | Family: XopF1, XopF2, XopF3\\ | ||
- | Prototype: XopF (// | + | Prototype: XopF (// |
- | RefSeq ID: XopF1 [[https:// | + | RefSeq ID: XopF1_Xe |
+ | Synonym: Hpa4\\ | ||
3D structure: Unknown | 3D structure: Unknown | ||
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=== How discovered? === | === How discovered? === | ||
- | XopF1 and XopF2 were identified in a genetic screen, using a Tn// | + | XopF1 and XopF2 were identified in a genetic screen, using a Tn// |
=== (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
- | Type III-dependent secretion of XopF1 and XopF2 was confirmed using a calmodulin-dependent adenylate cyclase reporter assay, with a Δ//hrpF// mutant strain serving as negative control (Roden //et al.//, 2004). | + | Type III-dependent secretion of XopF1 and XopF2 was confirmed using a calmodulin-dependent adenylate cyclase reporter assay, with a Δ//hrpF// mutant strain serving as negative control (Roden //et al.//, 2004, Mondal et al, 2016). |
Fragments of the //xopF1// gene are located within the //hrp// cluster of many // | Fragments of the //xopF1// gene are located within the //hrp// cluster of many // | ||
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* To study the possible virulence function of the putative // | * To study the possible virulence function of the putative // | ||
* Later, // | * Later, // | ||
- | * Additionally, | + | * Additionally, |
* // | * // | ||
=== Localization === | === Localization === | ||
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=== In xanthomonads === | === In xanthomonads === | ||
- | Yes (//e.g.//, //X. arboricola, X. bromi//, //X. citri, X. oryzae//, //X. euvesicatoria//, | + | Yes (//e.g.//, //X. arboricola, X. bromi//, //X. citri, X. oryzae// pv.// oryzae//, //X. euvesicatoria//, |
=== In other plant pathogens/ | === In other plant pathogens/ | ||
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===== Further reading ===== | ===== Further reading ===== | ||
- | Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of Xanthomonas campestris pv. // | + | Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of Xanthomonas campestris pv. // |