Table of Contents

XopC

Author: Alice Boulanger
Internal reviewer: Ralf Koebnik
Expert reviewer: FIXME

Class: XopC
Family: XopC
Prototype: XCV2435 (Xanthomonas euvesicatoria pv. euvesicatoria, ex Xanthomonas campestris pv. vesicatoria; strain 85-10)
RefSeq ID: CAJ24112.1 (834 aa)
3D structure: Unknown. XopC2 is predicted to be a 661 amino-acids protein with 5 alpha helices and 17 beta strands. It has 21 protein binding and one helical transmembrane region of 18 amino acids (Mondal et al., 2020).

Biological function

How discovered?

XopC was discovered in X. campestris pv. vesicatoria (Xcv) in a cDNA-AFLP screen (Noël et al., 2001). XopC was also identified in a genetic screen, using a Tn5-based transposon construct harboring the coding sequence for the HR-inducing domain of AvrBs2, but devoid of the effectors' T3SS signal, that was randomly inserted into the genome of Xcv strain 85-10. The XopC::AvrBs2 fusion protein triggered a Bs2-dependent hypersensitive response (HR) in pepper leaves (Roden et al., 2004).

(Experimental) evidence for being a T3E

A chimeric protein consisting of XopC fused to a c-myc epitope (first 466 amino acids plus 5 kDa epitope) was secreted into culture supernatants of a strain with a constitutively active form of HrpG in a type III secretion-dependent manner (Noël et al., 2003). Another chimeric protein consisting of XopC fused to an N-terminally deleted derivative of the effector protein AvrBs3 (XopC200-AvrBs3∆2-153) was used to assay the translocation of XopC into plant cells (Noël et al., 2003). AvrBs3∆2-153 was no longer delivered by the T3SS but was still able to induce the HR response in the pepper cultivar ECW-30R when artificially delivered by Agrobacterium (Szurek et al., 2002). XopC200-AvrBs3∆2-153 was detected in supernatant of a strain with a constitutively active form of hrpG in a type III secretion-dependent manner. Translocation of this chimeric protein into plant cells was confirmed by the observation of HR obtained on pepper cultivar ECW-30R.

Type III-dependent secretion was also confirmed using a calmodulin-dependent adenylate cyclase reporter assay, with a ΔhrpF mutant strain serving as negative control (Roden et al., 2004).

Translocation of the XopC::AvrBs3 chimeric protein was independent of the export control protein, HpaC (Büttner et al., 2006).

Regulation

The xopC gene was shown to be expressed in a hrpG- and hrpX-dependent manner. No PIP box was identified in the promoter region (Noël et al., 2001; Noël et al., 2003).

qRT-PCR revealed that transcript levels of 15 out of 18 tested non-TAL effector genes (as well as the regulatory genes hrpG and hrpX), including xopC, were significantly reduced in the Xanthomonas oryzae pv. oryzae ΔxrvC mutant compared with those in the wild-type strain PXO99A (Liu et al., 2016).

Phenotypes

Localization

XopC localises to the plant cell cytoplasm (Mondal et al., 2020) and the nucleus (Herzfeld, 2013).

Enzymatic function

XopC contains a predicted phosphoribosyl transferase domain and a putative haloacid dehalogenase (HAD)-like hydrolase domain in its C-terminal end. Phenotype of point mutation in catalytic domain have shown that HAD-like hydrolase activity is required for the XopC deleterious effect in yeast (Salomon et al., 2011). XopC2 represents a family of atypical kinases that specifically phosphorylate OSK1, a universal adaptor protein of the Skp1-Cullin-F-box ubiquitin ligase complexes (Wang et al., 2021).

Interaction partners

Yeast-2-hybrid studies revealed a XopC interactor, which also interacted with XopC in planta. The interactor localises to the plant cell cytoplasm and carries typical features of plant cytosolic O-acetylserine (thiol)lyases (OAS-TL). It shows OAS-TL activity in vivo and in vitro. The latter one is enhanced by adding XopC (Herzfeld, 2013).

Conservation

In xanthomonads

Close, full-length homologs (>90% sequence identity) of XopC1 have only been found in several strains of clade-2 xanthomonads, such as X. citri, X. euvesicatoria, X. fragariae, X. gardneri, X. hortorum, and X. phaseoli (BLASTP and TBLASTN performed in June 2020).

The distantly related XopC2 has homologs in X. citri, X. axonopodis, X. euvesicatoria, X. oryzae, X. phaseoli, and X. translucens (BLASTP and TBLASTN performed in June 2020)

In other plant pathogens/symbionts

XopC1: Ralstonia solanacearum (RipC2), Trinickia caryophylli (Paraburkholderia caryophylli), Xylophilus ampelinus (BLASTP and TBLASTN performed in June 2020).

XopC2: Acidovorax ssp., Pseudomonas cissicola, Ralstonia solanacearum (RipC1) (BLASTP and TBLASTN performed in June 2020).

Conservation

In xanthomonads

Close, full-length homologs (>90% sequence identity) of XopC1 have only been found in several strains of clade-2 xanthomonads, such as X. citri, X. euvesicatoria, X. fragariae, X. gardneri, X. hortorum, and X. phaseoli (BLASTP and TBLASTN performed in June 2020).

The distantly related XopC2 has homologs in X. citri, X. axonopodis, X. euvesicatoria, X. oryzae, X. phaseoli, and X. translucens (BLASTP and TBLASTN performed in June 2020)

In other plant pathogens/symbionts

XopC1: Ralstonia solanacearum (RipC2), Trinickia caryophylli (Paraburkholderia caryophylli), Xylophilus ampelinus (BLASTP and TBLASTN performed in June 2020).

XopC2: Acidovorax ssp., Pseudomonas cissicola [a pathovar of Xanthomonas citri], Ralstonia solanacearum (RipC1) (BLASTP and TBLASTN performed in June 2020).

References

Adlung N, Prochaska H, Thieme S, Banik A, Blüher D, John P, Nagel O, Schulze S, Gantner J, Delker C, Stuttmann J, Bonas U (2006). Non-host resistance induced by the Xanthomonas effector XopQ is widespread within the genus Nicotiana and functionally depends on EDS1. Front. Plant Sci. 30: 1796. DOI: 10.3389/fpls.2016.01796

Büttner D, Lorenz C, Weber E, Bonas U (2006). Targeting of two effector protein classes to the type III secretion system by a HpaC- and HpaB-dependent protein complex from Xanthomonas campestris pv. vesicatoria. Mol Microbiol. 59: 513-527. DOI: 10.1111/j.1365-2958.2005.04924.x

Herzfeld EM (2013). Identifizierung und Charakterisierung von dem pflanzlichen Interaktionspartner OAS-TL des Typ-III-Effektors XopC. Doctoral Thesis, Martin-Luther-Universität Halle-Wittenberg, Germany. PDF: opendata.uni-halle.de/handle/1981185920/7783

Liu Y, Long J, Shen D, Song C (2016). Xanthomonas oryzae pv. oryzae requires H-NS-family protein XrvC to regulate virulence during rice infection. FEMS Microbiol. Lett. 363: fnw067. DOI: 10.1093/femsle/fnw067

Mondal KK, Soni M, Verma G, Kulshreshtha A, Mrutyunjaya S, Kumar R ( 2020). Xanthomonas axonopodis pv. punicae depends on multiple non-TAL (Xop) T3SS effectors for its coveted growth inside the pomegranate plant through repressing the immune responses during bacterial blight development. Microbiol Res. 240: 126560 DOI: 10.1016/j.micres.2020.126560

Noël L, Thieme F, Gäbler J, Büttner D, Bonas U (2003). XopC and XopJ, two novel type III effector proteins from Xanthomonas campestris pv. vesicatoria. J. Bacteriol. 185: 7092-7102. DOI: 10.1128/jb.185.24.7092-7102.2003

Noël L, Thieme F, Nennstiel D, Bonas U (2001). cDNA-AFLP analysis unravels a genome-wide hrpG-regulon in the plant pathogen Xanthomonas campestris pv. vesicatoria. Mol. Microbiol. 41: 1271-1281. DOI: 10.1046/j.1365-2958.2001.02567.x

Roden JA, Belt B, Ross JB, Tachibana T, Vargas J, Mudgett MB (2004). A genetic screen to isolate type III effectors translocated into pepper cells during Xanthomonas infection. Proc. Natl. Acad. Sci. USA 101: 16624-16629. DOI: 10.1073/pnas.0407383101

Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of Xanthomonas campestris pv. vesicatoria type III effectors in yeast affects cell growth and viability. Mol. Plant-Microbe Interact. 24: 305-314. DOI: 10.1094/MPMI-09-10-0196

Szurek B, Rossier O, Hause G, Bonas U (2002). Type III-dependent translocation of the Xanthomonas AvrBs3 protein into the plant cell. Mol. Microbiol. 46: 13-23. DOI: 10.1046/j.1365-2958.2002.03139.x

Wang S, Li S, Wang J, Li Q, Xin XF, Zhou S, Wang Y, Li D, Xu J, Luo ZQ, He SY, Sun W (2021). A bacterial kinase phosphorylates OSK1 to suppress stomatal immunity in rice. Nat. Commun.12: 5479. doi: 10.1038/s41467-021-25748-4