EuroXanth DokuWiki

User Tools

Site Tools

Trace:
bacteria:t3e:t3e

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Next revision 		Previous revision
Last revision Both sides next revision
bacteria:t3e:t3e [2020/11/26 21:05]
doron.teper 		bacteria:t3e:t3e [2022/07/25 10:59]
rkoebnik
Line 1: Line 1:
 ====== Type III effectors ====== ====== Type III effectors ======
 +
 +//[[http://www.biopred.net/xanthomonas/|Link to the original Xanthomonas //Resource @ xanthomonas.org]]//
  
 [[:bacteria:t3e:effector_reviews|Review papers on type III effectors]] [[:bacteria:t3e:effector_reviews|Review papers on type III effectors]]
Line 25: Line 27:
 |XopG |[[:bacteria:t3e:xopg|XopG1]] |  |HopH (HopPtoH), HopAP |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346758.1|WP_011346758.1]] |[[http://pfam.xfam.org/family/PF14891.6|Peptidase_M91 superfamily]]; HEXXH motif, typical of zinc metallopeptidases | |XopG |[[:bacteria:t3e:xopg|XopG1]] |  |HopH (HopPtoH), HopAP |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346758.1|WP_011346758.1]] |[[http://pfam.xfam.org/family/PF14891.6|Peptidase_M91 superfamily]]; HEXXH motif, typical of zinc metallopeptidases |
 |XopG |[[:bacteria:t3e:xopg|XopG2]] |  |HopH (HopPtoH), HopAP |  |  | |XopG |[[:bacteria:t3e:xopg|XopG2]] |  |HopH (HopPtoH), HopAP |  |  |
-|XopG |[[:bacteria:t3e:xopf|XopG3]] |  |HopH (HopPtoH), HopAP |  |  |+|XopG |[[:bacteria:t3e:xopg|XopG3]] |  |HopH (HopPtoH), HopAP |  |  |
 |XopH |[[:bacteria:t3e:xoph|XopH1]] |AvrBs1.1 |HopAO1 (HopPtoD2) |[[https://www.ncbi.nlm.nih.gov/protein/WP_074038421.1|WP_074038421.1]] |[[http://pfam.xfam.org/family/PF14566.6|Protein tyrosine phosphatase-like phytase]] | |XopH |[[:bacteria:t3e:xoph|XopH1]] |AvrBs1.1 |HopAO1 (HopPtoD2) |[[https://www.ncbi.nlm.nih.gov/protein/WP_074038421.1|WP_074038421.1]] |[[http://pfam.xfam.org/family/PF14566.6|Protein tyrosine phosphatase-like phytase]] |
 |XopH |[[:bacteria:t3e:xoph|XopH2]] |AvrBs1.1 |HopAO1 (HopPtoD2) |  |  | |XopH |[[:bacteria:t3e:xoph|XopH2]] |AvrBs1.1 |HopAO1 (HopPtoD2) |  |  |
Line 32: Line 34:
 |XopJ |[[:bacteria:t3e:xopj1|XopJ1]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011347382.1|WP_011347382.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] | |XopJ |[[:bacteria:t3e:xopj1|XopJ1]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011347382.1|WP_011347382.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] |
 |XopJ |[[:bacteria:t3e:xopj2|XopJ2]] |AvrBsT |HopZ2 |[[https://www.ncbi.nlm.nih.gov/protein/WP_074052319.1|WP_074052319.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] | |XopJ |[[:bacteria:t3e:xopj2|XopJ2]] |AvrBsT |HopZ2 |[[https://www.ncbi.nlm.nih.gov/protein/WP_074052319.1|WP_074052319.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] |
-|XopJ |[[:bacteria:t3e:xopj3|XopJ3]] FIXME  |AvrRxv |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346137.1|WP_011346137.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] |+|XopJ |[[:bacteria:t3e:xopj3|XopJ3]] |AvrRxv |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011346137.1|WP_011346137.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] |
 |XopJ |[[:bacteria:t3e:xopj4|XopJ4]] |AvrXv4 |PopP1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_008572727.1|WP_008572727.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] | |XopJ |[[:bacteria:t3e:xopj4|XopJ4]] |AvrXv4 |PopP1 |[[https://www.ncbi.nlm.nih.gov/protein/WP_008572727.1|WP_008572727.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] |
 |XopJ |[[:bacteria:t3e:xopj5|XopJ5]] |AvrXccB |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_075287867.1|WP_075287867.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] | |XopJ |[[:bacteria:t3e:xopj5|XopJ5]] |AvrXccB |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_075287867.1|WP_075287867.1]] |[[http://pfam.xfam.org/family/PF03421.16|Ser/Thr acetyltransferase]] |
Line 78: Line 80:
 |XopAV |[[:bacteria:t3e:xopav|XopAV]] FIXME  |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_065628638.1|WP_065628638.1]] |  | |XopAV |[[:bacteria:t3e:xopav|XopAV]] FIXME  |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_065628638.1|WP_065628638.1]] |  |
 |XopAW |[[:bacteria:t3e:xopaw|XopAW]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011348129.1|WP_011348129.1]] |Calcium-binding protein; [[http://pfam.xfam.org/family/PF13499.6|EF-hand domain pair]] | |XopAW |[[:bacteria:t3e:xopaw|XopAW]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011348129.1|WP_011348129.1]] |Calcium-binding protein; [[http://pfam.xfam.org/family/PF13499.6|EF-hand domain pair]] |
-|XopAX |[[:bacteria:t3e:xopax|XopAX]] FIXME  |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011345694.1|WP_011345694.1]] |  |+|XopAX |[[:bacteria:t3e:xopax|XopAX]] |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011345694.1|WP_011345694.1]] |  |
 |XopAY |[[:bacteria:t3e:xopay|XopAY]] FIXME  |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_015462941.1|WP_015462941.1]] |  | |XopAY |[[:bacteria:t3e:xopay|XopAY]] FIXME  |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_015462941.1|WP_015462941.1]] |  |
 |XopAZ |[[:bacteria:t3e:xopaz|XopAZ]] FIXME  |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011050866.1|WP_011050866.1]] |SlpA superfamily; [[http://pfam.xfam.org/family/PF00254.28|FKBP-type peptidyl-prolyl cis-trans isomerase]] | |XopAZ |[[:bacteria:t3e:xopaz|XopAZ]] FIXME  |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011050866.1|WP_011050866.1]] |SlpA superfamily; [[http://pfam.xfam.org/family/PF00254.28|FKBP-type peptidyl-prolyl cis-trans isomerase]] |
Line 88: Line 90:
 |AvrXccA |AvrXccA2 |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011037538.1|WP_011037538.1]] |Unknown, maybe not a T3E | |AvrXccA |AvrXccA2 |  |  |[[https://www.ncbi.nlm.nih.gov/protein/WP_011037538.1|WP_011037538.1]] |Unknown, maybe not a T3E |
  
-\\ 
  
bacteria/t3e/t3e.txt ยท Last modified: 2022/07/25 10:59 by rkoebnik

Page Tools

Except where otherwise noted, content on this wiki is licensed under the following license: CC Attribution-Share Alike 4.0 International
CC Attribution-Share Alike 4.0 International Donate Powered by PHP Valid HTML5 Valid CSS Driven by DokuWiki