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bacteria:t3e:xope4

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bacteria:t3e:xope4 [2020/07/08 17:47]
rkoebnik [XopE4] 		bacteria:t3e:xope4 [2020/11/26 15:56]
abernal [Conservation]
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 Prototype: XAUC_31730 (//Xanthomonas fuscans// pv. //aurantifolii//)\\ Prototype: XAUC_31730 (//Xanthomonas fuscans// pv. //aurantifolii//)\\
 Protein Accession ID: [[https://www.ncbi.nlm.nih.gov/protein/EFF46466.1|EFF46466.1]] (388 aa)\\ Protein Accession ID: [[https://www.ncbi.nlm.nih.gov/protein/EFF46466.1|EFF46466.1]] (388 aa)\\
-3D structure: unknown.+3D structure: unknown
  
 ===== Biological function ===== ===== Biological function =====
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 Yes (//e.g.//, //X. axonopodis//). Yes (//e.g.//, //X. axonopodis//).
 +
 +XopE4 is also present in //X. fragariae // (Vandroemme// et al//., 2013) and it is not very conserved among //X. perforans// strains (Schwartz //et al//., 2015).
 === In other plant pathogens/symbionts === === In other plant pathogens/symbionts ===
  
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 Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of //Pseudomonas syringae// type III effectors require a catalytic triad and a novel N-terminal domain forfunction. Mol. Plant Microbe Interact. 20: 346-357. DOI: [[https://doi.org/10.1094/MPMI-20-4-0346|10.1094/MPMI-20-4-0346]]. Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of //Pseudomonas syringae// type III effectors require a catalytic triad and a novel N-terminal domain forfunction. Mol. Plant Microbe Interact. 20: 346-357. DOI: [[https://doi.org/10.1094/MPMI-20-4-0346|10.1094/MPMI-20-4-0346]].
 +
 +Schwartz, A. R., Potnis, N., Timilsina, S., Wilson, M., Patané, J., Martins Jr, J., & Vallad, G. E. (2015). Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity. Frontiers in Microbiology, 6, 535. DOI: [[https://doi.org/10.3389/fmicb.2015.00535|10.3389/fmicb.2015.00535]]
 +
 +Vandroemme, J., Cottyn, B., Baeyen, S., De Vos, P., & Maes, M. (2013). Draft genome sequence of //Xanthomonas fragariae// reveals reductive evolution and distinct virulence-related gene content. BMC genomics, //14// (1), 829. DOI: [[https://doi.org/10.1186/1471-2164-14-829|10.1186/1471-2164-14-829 ]]
  
bacteria/t3e/xope4.txt · Last modified: 2020/11/26 16:37 by rkoebnik

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