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bacteria:t3e:xopj4 [2020/07/09 13:55] daivaburo_yahoo.com [Biological function] |
bacteria:t3e:xopj4 [2020/07/20 10:14] daivaburo_yahoo.com [References] |
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Author: [[https:// | Author: [[https:// | ||
- | Internal reviewer: | + | Internal reviewer: |
Expert reviewer: FIXME | Expert reviewer: FIXME | ||
Class: XopJ\\ | Class: XopJ\\ | ||
Family: XopJ4\\ | Family: XopJ4\\ | ||
- | Prototype: AvrXv4 (// | + | Prototype: AvrXv4 (// |
RefSeq ID: [[https:// | RefSeq ID: [[https:// | ||
Synonym: AvrXv4\\ | Synonym: AvrXv4\\ | ||
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===== Biological function ===== | ===== Biological function ===== | ||
- | === How discovered? | + | **How discovered?** |
An avirulence gene named avrXv4 was isolated by mobilizing a total of 600 clones from a genomic DNA library of the T3 strain 91-118 into the //X. campestris// | An avirulence gene named avrXv4 was isolated by mobilizing a total of 600 clones from a genomic DNA library of the T3 strain 91-118 into the //X. campestris// | ||
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To ascertain if //X. campestris// | To ascertain if //X. campestris// | ||
+ | |||
+ | The immune pathway reasponsible for the perception of the // | ||
=== Regulation === | === Regulation === | ||
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AvrXv4 is an avirulence protein in //X. campestris //pv. // | AvrXv4 is an avirulence protein in //X. campestris //pv. // | ||
- | === Localization | + | |
+ | //N. benthamiana //ethyl methanesulfonate (EMS) mutants deficient for XopJ4 perception were idetified as having loss of function mutations in the gene encoding the nucleotide binding, leucine rich repeat (NLR) protein NbZAR1. Silecing of a recertor-like cytoplasmic kinase family XII gene, subsequently named XOPJ4 IMMUNITY 2 (JIM2), blocks perception of XopJ4 (Schultink //et al., //2019). | ||
+ | |||
+ | **Localization** | ||
AvrXv4 is localized to the plant cytoplasm (Roden //et al//., 2004). | AvrXv4 is localized to the plant cytoplasm (Roden //et al//., 2004). | ||
+ | |||
+ | <font 10.5pt/ | ||
+ | |||
=== Enzymatic function === | === Enzymatic function === | ||
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=== Interaction partners === | === Interaction partners === | ||
- | <font 18.0pt/ | + | ===== Conservation |
- | <font 10.5pt/ | + | **In xanthomonads** |
- | <font 10.5pt/Calibri, | + | <font 10.5pt/Arial, |
- | <font 10.5pt/ | + | **In other plant pathogens/ |
- | <font 10.5pt/Calibri, | + | <font 10.5pt/Arial, |
- | <font 10.5pt/Calibri, | + | <font 10.5pt/Arial, |
===== References ===== | ===== References ===== | ||
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Lavie M, Shillington E, Eguiluz C, Grimsley N, Boucher C (2002). PopP1, a new member of the YopJ/AvrRxv family of type III effector proteins, acts as a host-specificity factor and modulates aggressiveness of //Ralstonia solanacearum// | Lavie M, Shillington E, Eguiluz C, Grimsley N, Boucher C (2002). PopP1, a new member of the YopJ/AvrRxv family of type III effector proteins, acts as a host-specificity factor and modulates aggressiveness of //Ralstonia solanacearum// | ||
- | Roden J, Eardley L, Hotson A, Cao Y, Mudgett, MB (2004). Characterization of the // | + | Roden J, Eardley L, Hotson A, Cao Y, Mudgett MB (2004). Characterization of the // |
- | <font 10.5pt/ | + | <font 10.5pt/ |
- | Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz | + | Schultink A, Qi T, Bally J, Staskawicz |
- | <font 10.5pt/ | + | Timilsina S, Abrahamian P, Potnis N, Minsavage GV, White FF, Staskawicz BJ, Jones JB, Vallad GE, Goss EM (2016). Analysis of sequenced genomes |
+ | Timilsina S, Pereira-Martin JA, Minsavage GV, Iruegas-Bocardo F, Abrahamian, Potnis N, Kolaczkowski B, Vallad GE, Goss EM, Jones JB (2019). Multiple recombination events drive the current genetic structure of // | ||