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Molecular Diagnosis and Diversity for Regulated Xanthomonas
Bacterial virulence factors
This DokuWiki is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology)
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Author: Pavel Beran
Internal reviewer: Inga Moročko-Bičevska
Expert reviewer: 
NA
Capsicum chacoense (Cook & Stall, 1963).
Sequenced.
Transgene.
Expression of the Bs2 pepper gene confers resistance to bacterial spot disease in tomato (Tai et al., 1999). Transgenic Bs2 resistance confers effective field level control of bacterial spot disease in tomato (Horvath et al., 2012).
NA
Tomato Hawaii 7998.
Mapped on chromosome 1 (Yu et al., 1995).
Southern blot, RFLP.
HR-inducing resistance to T1 race (Yu et al., 1995).
NA
Tomato Hawaii 7998.
Mapped on chromosome 1 (Yu et al., 1995).
Southern blot, RFLP.
HR-inducing resistance to T1 race (Yu et al., 1995).
NA
Tomato Hawaii 7998.
Mapped on chromosome 5 (Yu et al., 1995).
Southern blot, RFLP, SNP (Yang et al., 2005).
HR-inducing resistance to T1 race (Yu et al., 1995).
(possibly alleles of the same gene with Xv3 and RxLA1589 ) (Zhao et al., 2015).
S. pimpinellifolium PI128216.
Mapped on chromosome 11, sequenced (Pei et al., 2012).
SNP, InDel, SSR (Pei et al., 2012).
NBS-LRR class of resistance (Robbins et al., 2009).
(possibly alleles of the same gene with Rx4 and Xv3) (Zhao et al., 2015).
S. pimpinellifolium LA1589.
Mapped on chromosome 11, sequenced (Pei et al., 2012).
SNP, InDel, SSR (Pei et al., 2012).
NBS-LRR class of resistance (Sun et al., 2011).
(possibly alleles of the same gene with Rx4 and RxLA1589 ) (Zhao et al., 2015).
S. pimpinellifolium PI126932.
Mapped on chromosome 11, sequenced (Pei et al., 2012).
SNP, InDel, SSR (Pei et al., 2012).
NBS-LRR class of resistance (Scott et al., 1996).
NA
L. pennellii LA716.
Mapped on chromosome 3, sequenced.
RFLP, PCR-based.
HR-inducing resistance to T3 race (Astua-Monge et al., 2000).
NA
Tomato Hawaii 7998.
Mapped on chromosome 1 (Yu et al., 1995).
Southern blot, RFLP.
HR-inducing resistance to T1 race (Yu et al., 1995).
NA
Tomato Hawaii 7998.
Mapped on chromosome 1 (Yu et al., 1995).
Southern blot, RFLP.
HR-inducing resistance to T1 race (Yu et al., 1995).
NA
Tomato Hawaii 7998.
Mapped on chromosome 5 (Yu et al., 1995).
Southern blot, RFLP, SNP (Yang et al., 2005).
HR-inducing resistance to T1 race (Yu et al., 1995).
(possibly alleles of the same gene with Xv3 and RxLA1589 ) (Zhao et al., 2015).
S. pimpinellifolium PI128216.
Mapped on chromosome 11, sequenced (Pei et al., 2012).
SNP, InDel, SSR (Pei et al., 2012).
NBS-LRR class of resistance (Robbins et al., 2009).
(possibly alleles of the same gene with Rx4 and Xv3) (Zhao et al., 2015).
S. pimpinellifolium LA1589.
Mapped on chromosome 11, sequenced (Pei et al., 2012).
SNP, InDel, SSR (Pei et al., 2012).
NBS-LRR class of resistance (Sun et al., 2011).
(possibly alleles of the same gene with Rx4 and RxLA1589 ) (Zhao et al., 2015).
S. pimpinellifolium PI126932.
Mapped on chromosome 11, sequenced (Pei et al., 2012).
SNP, InDel, SSR (Pei et al., 2012).
NBS-LRR class of resistance (Scott et al., 1996).
NA
L. pennellii LA716.
Mapped on chromosome 3, sequenced.
RFLP, PCR-based.
HR-inducing resistance to T3 race (Astua-Monge et al., 2000).
Astua-Monge G, Minsavage GV, Stall RE, Vallejos CE, Davis MJ, Jones JB (2000). Xv4-avrxv4: a new gene-for-gene interaction identified between Xanthomonas campestris pv. vesicatoria race T3 and the wild tomato relative Lycopersicon pennellii. Mol. Plant Microbe Interact. 13: 1346-1355. DOI: 10.1094/MPMI.2000.13.12.1346
Cook AA, Stall RE (1963). Inheritance of resistance in pepper to bacterial spot. Phytopathology 53: 1060-1062.
Horvath DM, Stall RE, Jones JB, Pauly MH, Vallad GE, Dahlbeck D, Staskawicz BJ, Scott JW (2012). Transgenic resistance confers effective field level control of bacterial spot disease in tomato. PLoS One 7: e42036. DOI: 10.1371/journal.pone.0042036
Pei C, Wang H, Zhang J, Wang Y, Francis DM, Yang W (2012). Fine mapping and analysis of a candidate gene in tomato accession PI128216 conferring hypersensitive resistance to bacterial spot race T3. Theor. Appl. Genet. 124: 533-542. DOI: 10.1007/s00122-011-1726-1
Robbins MD, Darrigues A, Sim SC, Masud MA, Francis DM (2009). Characterization of hypersensitive resistance to bacterial spot race T3 (Xanthomonas perforans) from tomato accession PI 128216. Phytopathology 99: 1037-1044. DOI: 10.1094/PHYTO-99-9-1037
Scott JW, Stall RE, Jones JB, Somodi GC (1996). A single gene controls the hypersensitive response of Hawaii 7981 to race 3 (T3) of the bacterial spot pathogen. Rpt. Tomato Genet. Coop. 46: 23.
Sun HJ, Liu XX, Li WH, Yang WC (2011). Preliminary mapping of a gene in tomato accession LA1589 conferring resistance to race T3 of bacterial spot. J. Agric. Univ. Hebei. 34: 65-69.
Tai TH, Dahlbeck D, Clark ET, Gajiwala P, Pasion R, Whalen MC, Stall RE, Staskawicz BJ (1999). Expression of the Bs2 pepper gene confers resistance to bacterial spot disease in tomato. Proc. Natl. Acad. Sci. USA 96: 14153-14158. DOI: 10.1073/pnas.96.24.14153
Yang W, Sacks EJ, Lewis Ivey ML, Miller SA, Francis DM (2005). Resistance in Lycopersicon esculentum intraspecific crosses to race T1 strains of Xanthomonas campestris pv. vesicatoria causing bacterial spot of tomato. Phytopathology. 95: 519-527. DOI: 10.1094/PHYTO-95-0519
Yu ZH, Wang JF, Stall RE, Vallejos CE (1995). Genomic localization of tomato genes that control a hypersensitive reaction to Xanthomonas campestris pv. vesicatoria (Doidge) Dye. Genetics 141: 675-682. PDF: www.ncbi.nlm.nih.gov/pmc/articles/PMC1206765/pdf/ge1412675.pdf
Zhao B, Cao H, Duan J, Yang W (2015). Allelic tests and sequence analysis of three genes for resistance to Xanthomonas perforans race T3 in tomato. Hort. Plant J. 1: 41-47. DOI: 10.16420/j.issn.2095-9885.2015-0001
Adhikari P, Adhikari TB, Louws FJ, Panthee DR (2020). Advances and challenges in bacterial spot resistance breeding in tomato (Solanum lycopersicum L.). Int. J. Mol. Sci. 21: 1734. DOI: 10.3390/ijms21051734
de Souza MFM, Rodrigues R, do Amaral jr. AT, Sudré CP (2008). Resistance to Xanthomonas spp. in tomato: diallel analysis and gene effects estimative in a breeding programme carried out in Brazil. J. Phytopathol. 156: 660-667. DOI: 10.1111/j.1439-0434.2008.01474.x
Hutton SF, Scott JW, Jones JB (2010). Inheritance of resistance to bacterial spot race T4 from three tomato breeding lines with differing resistance backgrounds. J. Amer. Soc. Hort. Sci. 135: 150-158. DOI: 10.21273/JASHS.135.2.150
Stall RE, Jones JB, Minsavage GV (2009). Durability of resistance in tomato and pepper to xanthomonads causing bacterial spot. Ann. Rev. Phytopathol. 47: 265-284. DOI: 10.1146/annurev-phyto-080508-081752
