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bacteria:t3e:xopg [2020/06/30 17:30] rkoebnik [References] |
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- | ====== XopG ====== | ||
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- | Author: Camila Fernandes\\ | ||
- | Internal reviewer: Leonor Martins\\ | ||
- | Expert reviewer: FIXME | ||
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- | Class: XopG\\ | ||
- | Family: XopG1, XopG2, XopG3\\ | ||
- | Prototype: XopG (// | ||
- | RefSeq ID: [[http:// | ||
- | 3D structure: [[https:// | ||
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- | ===== Biological function ===== | ||
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- | === How discovered? === | ||
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- | XopG was identified based on homology searches using tblastn analysis. Known T3E proteins from plant and animal pathogens were used as query against all contigs of the draft genomes of //X. vesicatoria//, | ||
- | === (Experimental) evidence for being a T3E === | ||
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- | The T3SS-dependent translocation evidence for XopG protein was confirmed using the AvrBs2 reporter gene assay (Thieme, 2006; Potnis //et al//., 2011). | ||
- | === Regulation === | ||
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- | XopG belongs to class B and is still translocated in the absence of HpaB, being constitutively expressed (Thieme, 2006; White//et al//., 2009). XopG was identified as part of the putative HrpX regulon in //X. campestris// | ||
- | === Phenotypes === | ||
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- | A deletion of xopG not display differences in the induction of disease symptoms or hypersensibility response. XopG trigger cell death in different Solanaceae, including // | ||
- | === Localization === | ||
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- | Confocal laser scanning microscopy revealed a localization of XopG::GFP exclusively to the plant cell nucleus (White //et al//., 2009). | ||
- | === Enzymatic function === | ||
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- | XopG is a member of the HopH family from // | ||
- | === Interaction partners === | ||
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- | Unknown. | ||
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- | ===== Conservation ===== | ||
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- | === In xanthomonads === | ||
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- | Yes (// | ||
- | === In other plant pathogens/ | ||
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- | Yes (// | ||
- | ===== References ===== | ||
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- | da Silva AC, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida NF, Alves LM, do Amaral AM, Bertolini MC, Camargo LE, Camarotte G, Cannavan F, Cardozo J, Chambergo F, Ciapina LP, Cicarelli RM, Coutinho LL, Cursino-Santos JR, El-Dorry H, Faria JB, Ferreira AJ, Ferreira RC, Ferro MI, Formighieri EF, Franco MC, Greggio CC, Gruber A, Katsuyama AM, Kishi LT, Leite RP, Lemos EG, Lemos MV, Locali EC, Machado MA, Madeira AM, Martinez-Rossi NM, Martins EC, Meidanis J, Menck CF, Miyaki CY, Moon DH, Moreira LM, Novo MT, Okura VK, Oliveira MC, Oliveira VR, Pereira HA, Rossi A, Sena JA, Silva C, de Souza RF, Spinola LA, Takita MA, Tamura RE, Teixeira EC, Tezza RI, Trindade dos Santos M, Truffi D, Tsai SM, White FF, Setubal JC, Kitajima JP (2002). Comparison of the genomes of two // | ||
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- | Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol MT, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12: 1-23. DOI: [[https:// | ||
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- | Schulze S, Kay S, Büttner D, Egler M, Eschen-Lippold L, Hause G, Krüger A, Lee J, Müller O, Scheel D, Szczesny R, Thieme F, Bonas U (2012). Analysis of new type III effectors from // | ||
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- | Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Büttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klösgen U, Patschkowski T, Rückert C, Rupp O, Schneiker S, Schuster SC, Vorhölter FJ, Weber E, Pühler A, Bonas U, Bartels D, Kaiser O (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium // | ||
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- | Thieme F (2006). Genombasierte Identifizierung neuer potentieller Virulenzfaktoren von // | ||
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- | White FF, Potnis N, Jones JB, Koebnik R (2009). The type III effectors of // | ||