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bacteria:t3e:xope5 [2020/06/30 18:34] rkoebnik [References] |
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- | ====== XopE5 ====== | ||
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- | Author: Jaime Cubero\\ | ||
- | Internal reviewer: Eran Bosis\\ | ||
- | Expert reviewer: FIXME | ||
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- | Class: XopE\\ | ||
- | Family: XopE5\\ | ||
- | Prototype: (// | ||
- | RefSeq ID: [[https:// | ||
- | 3D structure: Unknown. | ||
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- | ===== Biological function ===== | ||
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- | === How discovered? === | ||
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- | XopE5 (HopX1) was first identified by sequence homology searches (Peng //et al//., 2016; Falahi //et al//., 2017). | ||
- | === (Experimental) evidence for being a T3E === | ||
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- | Homology to other XopE effectors. | ||
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- | === Regulation === | ||
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- | Not known. | ||
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- | === Phenotypes === | ||
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- | Not known. | ||
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- | === Localization === | ||
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- | Not known. | ||
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- | === Enzymatic function === | ||
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- | XopE5 belongs to the HopX effector family, which are part of the transglutaminase superfamily (Nimchuk //et al//., 2007). | ||
- | === Interaction partners === | ||
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- | Not known. | ||
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- | ===== Conservation ===== | ||
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- | === In xanthomonads === | ||
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- | Yes (//e.g.//, //X. translucens// | ||
- | === In other plant pathogens/ | ||
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- | Not known. | ||
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- | ===== References ===== | ||
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- | Falahi Charkhabi N, Booher NJ, Peng Z, Wang L, Rahimian H, Shams-Bakhsh M, Liu Z, Liu S, White FF, Bogdanove AJ (2017). Complete genome sequencing and targeted mutagenesis reveal virulence vontributions of Tal2 and Tal4b of // | ||
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- | Nimchuk ZL, Fisher EJ, Desvaux D, Chang JH, Dangl JL (2007). The HopX (AvrPphE) family of // | ||
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- | Peng Z, Hu Y, Xie J, Potnis N, Akhunova A, Jones J, Liu Z, White F, Liu S (2016). Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of // | ||