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- | ====== XopP ====== | ||
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- | Author: [[https:// | ||
- | Internal reviewer: Harrold van den Burg\\ | ||
- | Expert reviewer: FIXME | ||
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- | Class: XopP\\ | ||
- | Family: XopP\\ | ||
- | Prototype: XopP (// | ||
- | RefSeq ID: [[https:// | ||
- | 3D structure: Unknown | ||
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- | ===== Biological function ===== | ||
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- | === How discovered? === | ||
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- | XopP was identified in a genetic screen, using a Tn// | ||
- | === (Experimental) evidence for being a T3E === | ||
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- | Type III-dependent secretion was confirmed using a calmodulin-dependent adenylate cyclase reporter assay, with a Δ//hrpF// mutant strain serving as negative control (Roden et al., 2004). Using an AvrBs1 reporter fusion, XopP< | ||
- | === Regulation === | ||
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- | //xopP// homologs were shown to contain the PIP box in their promoter region. | ||
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- | qRT-PCR revealed that transcript levels of 15 out of 18 tested non-TAL effector genes (as well as the regulatory genes //hrpG// and //hrpX//), including //xopP//, were significantly reduced in the // | ||
- | === Phenotypes === | ||
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- | Roden //et al.// did not find significant growth defects of a //Xcv// Δ//xopP// mutant in susceptible pepper and tomato leaves (Roden et al., 2004). | ||
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- | XopP< | ||
- | === Localization === | ||
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- | XopP< | ||
- | === Enzymatic function === | ||
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- | Unknown. | ||
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- | === Interaction partners === | ||
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- | XopP< | ||
- | ===== Conservation ===== | ||
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- | === In xanthomonads === | ||
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- | Yes (//e.g.//, //X. campestris//, | ||
- | === In other plant pathogens/ | ||
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- | Yes (//e.g.//, //Ralstonia solanacearum// | ||
- | ===== References ===== | ||
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- | Furutani A, Takaoka M, Sanada H, Noguchi Y, Oku T, Tsuno K, Ochiai H, Tsuge S (2009). Identification of novel type III secretion effectors in // | ||
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- | Ishikawa K, Yamaguchi K, Sakamoto K, Yoshimura S, Inoue K, Tsuge S, Kojima C, Kawasaki T (2014). Bacterial effector modulation of host E3 ligase activity suppresses PAMP-triggered immunity in rice. Nat. Commun. 5: 5430. DOI: [[https:// | ||
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- | Liu Y, Long J, Shen D, Song C (2016). // | ||
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- | Roden JA, Belt B, Ross JB, Tachibana T, Vargas J, Mudgett MB (2004). A genetic screen to isolate type III effectors translocated into pepper cells during // | ||