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- | ====== XopAL1 ====== | ||
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- | Author: [[https:// | ||
- | Internal reviewer: FIXME \\ | ||
- | Expert reviewer: FIXME | ||
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- | Class: XopAL\\ | ||
- | Family: XopAL1\\ | ||
- | Prototype: XopAL (// | ||
- | RefSeq ID: [[https:// | ||
- | 3D structure: Unknown | ||
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- | ===== Biological function ===== | ||
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- | === How discovered? === | ||
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- | XopAL was first identified in //X. campestris// | ||
- | === (Experimental) evidence for being a T3E === | ||
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- | Construction of a chimeric protein between the N-terminal region of XC_2995 (XopAL1) and a truncated AvrBS1 protein (AvrBS1< | ||
- | === Regulation === | ||
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- | The expression of //xopAL1// gene was shown to be positively regulated by //hrpX// (Jiang //et al//., 2009) and //hrpG// (Jiang //et al//., 2009; Roux //et al//., 2015). Presence of a PIP box (Jiang //et al//., 2009; Bogdanove //et al//., 2013; Roux //et al//., 2015). | ||
- | === Phenotypes === | ||
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- | XopAL of Xcc8004 is required for full pathogenicity on Chinese radish (//Raphanus sativus// var. // | ||
- | === Localization === | ||
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- | Unknown. | ||
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- | === Enzymatic function === | ||
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- | Unknown. | ||
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- | === Interaction partners === | ||
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- | Unknown. | ||
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- | ===== Conservation ===== | ||
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- | === In xanthomonads === | ||
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- | Yes, //X. campestris//, | ||
- | === In other plant pathogens/ | ||
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- | // | ||
- | ===== References ===== | ||
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- | Bocsanczy AM, Schneider DJ, DeClerck GA, Cartinhour S, Beer SV (2012). HopX1 in //Erwinia amylovora// functions as an avirulence protein in apple and is regulated by HrpL. J. Bacteriol. 194: 553-560. DOI: [[https:// | ||
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- | Bogdanove AJ, Koebnik R, Lu H, Furutani A, Angiuoli SV, Patil PB, Van Sluys MA, Ryan RP, Meyer DF, Han SW, Aparna G, Rajaram M, Delcher AL, Phillippy AM, Puiu D, Schatz MC, Shumway M, Sommer DD, Trapnell C, Benahmed F, Dimitrov G, Madupu R, Radune D, Sullivan S, Jha G, Ishihara H, Lee SW, Pandey A, Sharma V, Sriariyanun M, Szurek B, Vera-Cruz CM, Dorman KS, Ronald PC, Verdier V, Dow JM, Sonti RV, Tsuge S, Brendel VP, Rabinowicz PD, Leach JE, White FF, Salzberg SL (2011). Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic // | ||
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- | Jiang W, Jiang BL, Xu RQ, Huang JD, Wei HY, Jiang GF, Cen WJ, Liu J, Ge YY, Li GH, Su LL, Hang XH, Tang DJ, Lu GT, Feng JX, He YQ, Tang JL (2009). Identification of six type III effector genes with the PIP box in // | ||
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- | Nissinen RM, Ytterberg AJ, Bogdanove AJ, VAN Wijk KJ, Beer SV (2007). Analyses of the secretomes of //Erwinia amylovora// and selected hrp mutants reveal novel type III secreted proteins and an effect of HrpJ on extracellular harpin levels. Mol. Plant Pathol. 8:55-67. DOI: [[https:// | ||
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- | Peeters N, Carrère S, Anisimova M, Plener L, Cazalé AC, Genin S (2013). Repertoire, unified nomenclature and evolution of the Type III effector gene set in the //Ralstonia solanacearum// | ||
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- | Roux B, Bolot S, Guy E, Denancé N, Lautier M, Jardinaud MF, Fischer-Le Saux M, Portier P, Jacques MA, Gagnevin L, Pruvost O, Lauber E, Arlat M, Carrère S, Koebnik R, Noël LD (2015). Genomics and transcriptomics of // | ||