This shows you the differences between two versions of the page.
Both sides previous revision Previous revision Next revision | Previous revision Next revision Both sides next revision | ||
bacteria:t3e:xopap [2020/07/09 14:06] rkoebnik [References] |
bacteria:t3e:xopap [2020/11/26 20:21] doron.teper |
||
---|---|---|---|
Line 1: | Line 1: | ||
- | ====== XopAP ====== | ||
- | |||
- | Author: [[https:// | ||
- | Internal reviewer: FIXME \\ | ||
- | Expert reviewer: FIXME | ||
- | |||
- | Class: XopAP\\ | ||
- | Family: XopAP\\ | ||
- | Prototype: XopAP (// | ||
- | RefSeq ID: [[https:// | ||
- | 3D structure: Unknown | ||
- | |||
===== Biological function ===== | ===== Biological function ===== | ||
=== How discovered? === | === How discovered? === | ||
- | XopAP (XCV3138 in //X. euvesicatoria// | + | XopAP ([[http:// |
=== (Experimental) evidence for being a T3E === | === (Experimental) evidence for being a T3E === | ||
Line 21: | Line 9: | ||
=== Regulation === | === Regulation === | ||
- | Unknown. | + | In //X. euvesicatoria// |
=== Phenotypes === | === Phenotypes === | ||
- | A // | + | A // |
+ | |||
+ | XopAP was shown to be induced in //X. citri// subsp. //citri// strain 306 in nutrient broth (NB; Jalan //et al//., 2013). | ||
=== Localization === | === Localization === | ||
Line 30: | Line 21: | ||
=== Enzymatic function === | === Enzymatic function === | ||
- | Unknown. | + | Unknown. |
=== Interaction partners === | === Interaction partners === | ||
Line 39: | Line 30: | ||
=== In xanthomonads === | === In xanthomonads === | ||
- | Yes (//e.g.,// //X. campestris//, | + | Yes (//e.g.,// //X. campestris//, |
=== In other plant pathogens/ | === In other plant pathogens/ | ||
- | Yes (// | + | Yes (// |
===== References ===== | ===== References ===== | ||
+ | |||
+ | Constantin EC, Haegeman A, Van Vaerenbergh J, Baeyen S, Van Malderghem C, Maes M, Cottyn B (2017). Pathogenicity and virulence gene content of // | ||
+ | |||
+ | Jalan N, Kumar D, Andrade MO, Yu F, Jones JB, Graham JH, White FF, Setubal JC, Wang N (2013). Comparative genomic and transcriptome analyses of pathotypes of // | ||
Nakano M, Mukaihara T (2018). //Ralstonia solanacearum// | Nakano M, Mukaihara T (2018). //Ralstonia solanacearum// | ||
Peeters N, Carrere S, Anisimova M, Plener L, Cazale AC, Genin S (2013). Repertoire, unified nomenclature and evolution of the type III effector gene set in the //Ralstonia solanacearum// | Peeters N, Carrere S, Anisimova M, Plener L, Cazale AC, Genin S (2013). Repertoire, unified nomenclature and evolution of the type III effector gene set in the //Ralstonia solanacearum// | ||
+ | |||
+ | Peng, Z., Hu, Y., Xie, J., Potnis N, Akhunova A, Jones J, Liu Z, White FJ, Liu S (2016). Long read and single molecule DNA sequencing simplifies genome assembly and TAL effector gene analysis of // | ||
Popov G, Fraiture M, Brunner F, Sessa G (2018). Multiple // | Popov G, Fraiture M, Brunner F, Sessa G (2018). Multiple // | ||
- | Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12: 146. DOI: [[https:// | + | Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM, Momol M, White FF, Preston JF, Vinatzer BA, Koebnik R, Setubal JC, Norman DJ, Staskawicz BJ, Jones JB (2011). Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12: 146. DOI: [[https:// |
Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel // | Teper D, Burstein D, Salomon D, Gershovitz M, Pupko T, Sessa G (2016). Identification of novel // | ||
+ | |||
+ | Zhang Y, Teper D, Xu J, Wang N (2019). | ||