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plant:ryegrass [2020/06/15 15:04]
rkoebnik [Candidate gene: Brassinosteroid Insensitive 1 (BRI1)-associated kinase-interacting receptor-like kinase 1]
plant:ryegrass [2020/07/01 15:21]
rkoebnik [Candidate gene: Brassinosteroid Insensitive 1 (BRI1)-associated kinase-interacting receptor-like kinase 1]
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 Author: Florian Goettelmann\\ Author: Florian Goettelmann\\
-Internal reviewer: FIXME \\+Internal reviewer: Jaroslav Michalko\\
 Expert reviewer: FIXME Expert reviewer: FIXME
  
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 === Brief description === === Brief description ===
  
-Explained 66.8% of resistance in one greenhouse experiment and 13.3 and 83.8% of resistance in two field experiments (Studer //et al//., 2006).+Explained 66.8% of resistance in one greenhouse experiment and <del>13.3</del> 43.3% — //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 13:57//— and 83.8% of resistance in two field experiments (Studer //et al.//, 2006).
  
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 //NA// //NA//
- 
 === Source === === Source ===
  
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 === Molecular markers === === Molecular markers ===
  
-P38M50_410 (AFLP).+<del>P38M50_410 (AFLP)</del>P32M50_410 (AFLP) — //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 14:01//—
  
 === Brief description === === Brief description ===
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 //NA// //NA//
- 
 === Source === === Source ===
  
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 === Molecular markers === === Molecular markers ===
  
-P38M50_410 (AFLP).+<del>P38M50_410 (AFLP). </del>LMgSSR04-06F (SSR) — //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 14:11//—
  
 === Brief description === === Brief description ===
  
-Explained 10.8% of resistance in one field experiment (Studer //et al.//, 2006).+Explained <del>10.8</del> 2.9— //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 14:15//— of resistance in one field experiment<sup><font 11.0pt/inherit;;#333333;;inherit></font></sup>  (Studer //et al.//, 2006).
  
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 //NA// //NA//
- 
 === Source === === Source ===
  
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 //NA// //NA//
- 
 === Source === === Source ===
  
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 ==== Candidate genes ==== ==== Candidate genes ====
  
-==== Candidate gene: F-BstCA-MseCG-188 ====+==== Candidate gene: F-BstCA-MseCG-188 F-BstCT-MseCA-188 — Jaroslav Michalko 2020/06/18 15:08 — ====
  
 === Synonyms === === Synonyms ===
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
-Showed homology to an EST sequence derived from //Vitis vinifera// infected with //Xylella fastidiosa// (Rechsteiner //et al.//, 2006).+Showed homology to <del>an EST sequence derived from //Vitis vinifera// infected with //Xylella fastidiosa// </del> a transforming growth factor TGF-β receptor-interacting protein from //O. sativa// (Rechsteiner //et al.//, 2006)<sup> </sup>  — //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 15:12//—
  
 ---- ----
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
-Showed homology to transforming growth factor TGF-β receptor-interacting protein (Rechsteiner //et al.//, 2006).+Showed homology to <del>transforming growth factor TGF-β receptor-interacting protein</del> an EST sequence derived from //Vitis vinifera// infected with //Xylella fastidiosa// (Rechsteiner //et al.//, 2006)<sup> </sup>  — //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 15:16//—.
  
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
-Belongs to the nodulin26-like intrinsic protein family of aquaporins (Wichmann //et al.//, 2011).+Belongs to the nodulin26-like intrinsic protein family of aquaporins (Wichmann //et al.//, 2011) .
  
 ---- ----
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
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 //NA// //NA//
- 
 === Source === === Source ===
  
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
-Belongs to the synaptoverbin-like family (Wichmann //et al.//, 2011).+Belongs to the <del>synaptoverbin</del> synaptobrevin-like vesicle-associated membrane protein <del>family</del> (Wichmann //et al.//, 2011) — //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 15:26//—.
  
 ---- ----
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
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 //NA// //NA//
- 
 === Brief description === === Brief description ===
  
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 ---- ----
  
-==== Candidate gene: CRINKLY4-related protein ====+==== Candidate gene: AT5G47850; CRINKLY4-related protein — Jaroslav Michalko 2020/06/18 15:35 — ====
  
 === Synonyms === === Synonyms ===
  
 //NA// //NA//
- 
 === Source === === Source ===
  
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 === Brief description === === Brief description ===
  
-Serine/threonine protein kinase-like CCR4-related protein (Knorst //et al.//, 2019).+Serine/threonine protein kinase-like CCR4-related protein (Knorst et al., 2019).
  
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-==== Candidate gene: SWEET17 ====+==== Candidate gene: AT3G07960; SWEET17 — Jaroslav Michalko 2020/06/18 15:37 — ====
  
 === Synonyms === === Synonyms ===
  
 //NA// //NA//
- 
 === Source === === Source ===
  
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 === Brief description === === Brief description ===
  
-Belongs to the nodulin MtN3 family protein (Knorst //et al.//, 2019).+Belongs to the nodulin MtN3 family protein (Knorst et al., 2019).
  
 ---- ----
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 === Brief description === === Brief description ===
  
-Belongs to the nodulin MtN3 family protein (Knorst //et al//., 2019). FIXME \\+Belongs to the<del> nodulin MtN3 family protein</del> BAK1- interacting receptor-like kinase 1 (Knorst et al., 2019)<sup> </sup>  — //[[jaroslav.michalko@gmail.com|Jaroslav Michalko]] 2020/06/18 15:40//— FIXME
  
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 ===== References ===== ===== References =====
  
-Knorst VByrne SYates SAsp T, Widmer F, Studer B, Kölliker R (2019). Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 132947-958. DOI: [[https://doi.org/10.1007/s00122-018-3250-z|10.1007/s00122-018-3250-z]]+<sup><font 11.0pt/inherit;;#333333;;inherit>[</font> </sup>   <sup><font 11.0pt/inherit;;#333333;;white>1]</font>  </sup>   Studer BBoller BHerrmann DBauer E, Posselt UK, Widmer F, Kölliker R (2006). Genetic mapping reveals single major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 113661-671. DOI: [[https://doi.org/10.1007/s00122-006-0330-2|10.1007/s00122-006-0330-2]]
  
-Rechsteiner MP, Widmer F, Kölliker R (2006). Expression profiling of Italian ryegrass (Lolium multiflorum Lam.) during infection with the bacterial wilt inducing pathogen //Xanthomonas translucens// pv. //graminis//. Plant Breeding 125: 43-51. DOI: [[https://doi.org/10.1111/j.1439-0523.2006.01170.x|10.1111/j.1439-0523.2006.01170.x]]+<sup><font 11.0pt/inherit;;#333333;;inherit>[2</font> </sup>   <sup><font 11.0pt/inherit;;#333333;;white>]</font>  </sup>   Rechsteiner MP, Widmer F, Kölliker R (2006). Expression profiling of Italian ryegrass (Lolium multiflorum Lam.) during infection with the bacterial wilt inducing pathogen //Xanthomonas translucens// pv. //graminis//. Plant Breeding 125: 43-51. DOI: [[https://doi.org/10.1111/j.1439-0523.2006.01170.x|10.1111/j.1439-0523.2006.01170.x]]
  
-Studer B, Boller B, Herrmann DBauer E, Posselt UK, Widmer F, Kölliker R (2006). Genetic mapping reveals a single major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 113661-671. DOI: [[https://doi.org/10.1007/s00122-006-0330-2|10.1007/s00122-006-0330-2]]+<sup><font 11.0pt/inherit;;#333333;;inherit>[3</font> </sup>   <sup><font 11.0pt/inherit;;#333333;;white>]</font>  </sup>   Wichmann FAsp T, Widmer F, Kölliker R (2011). Transcriptional responses of Italian ryegrass during interaction with //Xanthomonas translucens// pv//graminis// reveal novel candidate genes for bacterial wilt resistance. Theor. Appl. Genet. 122567-579. DOI: [[https://doi.org/10.1007/s00122-010-1470-y|10.1007/s00122-010-1470-y]]
  
-Wichmann F, Asp T, Widmer F, Kölliker R (2011). Transcriptional responses of Italian ryegrass during interaction with //Xanthomonas translucens// pv//graminis// reveal novel candidate genes for bacterial wilt resistance. Theor. Appl. Genet. 122567-579. DOI: [[https://doi.org/10.1007/s00122-010-1470-y|10.1007/s00122-010-1470-y]]+<sup><font 11.0pt/inherit;;#333333;;inherit>[4</font> </sup>   <sup><font 11.0pt/inherit;;#333333;;white>]</font>  </sup>   Knorst V, Byrne S, Yates S, Asp T, Widmer F, Studer B, Kölliker R (2019). Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (//Lolium multiflorum// Lam.). Theor. Appl. Genet. 132947-958. DOI: [[https://doi.org/10.1007/s00122-018-3250-z|10.1007/s00122-018-3250-z]]
  
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