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Molecular Diagnosis and Diversity for Regulated Xanthomonas
Bacterial virulence factors
This DokuWiki is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology)
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Author: Ralf Koebnik
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Rice cultivar Kogyoku (Sakaguchi, 1967).
Mapped on chromosome 4 (Sakaguchi, 1967); sequenced (Yoshimura et al., 1998).
RAPD markers (Yoshimura et al., 1995).
NB-LRR class protein (Yoshimura et al., 1998).
Sakaguchi S (1967). Linkage studies on the resistance to bacterial leaf blight, Xanthomonas oryzae (Uyeda et Ishiyama) Dowson, in rice. Bull. Natl. Inst. Agr. Sci. Ser. D 16: 1-18.
Yoshimura S, Yamanouchi U, Katayose Y, Toki S, Wang ZX, Kono I, Kurata N, Yano M, Iwata N, Sasaki T (1998). Expression of Xa1, a bacterial blight-resistance gene in rice, is induced by bacterial inoculation. Proc. Natl. Acad. Sci. U.S.A. 95(4): 1663-1668. DOI: 10.1073/pnas.95.4.1663.
Yoshimura S, Yoshimura A, Nelson R.J., Mew T.W., Iwata N. (1995). Tagging Xa-1, the bacterial blight resistance gene in rice, by using RAPD markers. Breed. Sci. 45(1): 81- 85. DOI: 10.1270/jsbbs1951.45.81.
Rice cultivar Te-tep (Sakaguchi, 1967).
Mapped on the long arm of chromosome 4.
SSR markers (He et al., 2006).
Sakaguchi S (1967). Linkage studies on the resistance to bacterial leaf blight, Xanthomonas oryzae (Uyeda et Ishiyama) Dowson, in rice. Bull. Natl. Inst. Agr. Sci. Ser. D 16: 1-18.
He Q, Li D, Zhu Y, Tan M, Zhang D, Lin X (2006). Fine mapping of Xa2, a bacterial blight resistance gene in rice. Mol. Breed. 17(1): 106. DOI: 10.1007/s11032-005-8698-2.
Xa-w (Ezuka et al., 1975).
Rice cultivar Wase Aikoku 3 (Ezuka et al., 1975), Chugoku 45 (Ogawa et al., 1986a), Java 14 (Ogawa et al., 1986a).
Mapped on the long arm of chromosome 4 (Yoshimura et al., 1992); sequenced (Sun et al., 2004; Xiang et al., 2006).
RFLP marker (Yoshimura et al., 1995), PCR-based SNP markers (Hur et al., 2013).
Allelic to Xa6 (Ogawa et al., 1986b); allelic to Xa26 (Xiang et al., 2006); NB-LRR class protein.
Ezuka A, Horino O, Toriyama K, Shinoda H, Morinaka T (1975). Inheritance of resistance of rice variety Wase Aikoku 3 to Xanthomonas oryzae. Bull. Tokai-Kinki Natl Agric. Exp. Stn. 28: 124-130.
Hur YJ, Jeung JU, Kim SY, Park HS, Cho JH, Lee JY, Sohn YB, Song YC, Park DS, Lee CW, Sohn JG, Nam MH, Lee JH (2013). Functional markers for bacterial blight resistance gene Xa3 in rice. Mol. Breed. 31(4): 981-985. DOI: 10.1007/s11032-012-9831-7.
Ogawa T, Yamamoto T, Khush GS, Mew TW (1986a). The Xa-3 gene for resistance to Philippine races of bacterial blight of rice. Rice Genetics Newsletter 3: 77.
Ogawa T, Yamamoto T, Khush GS, Mew TW (1986b). The relationship between genes Xa-3 and Xa-6 for resistance to rice bacterial blight. Rice Genetics Newsletter 3: 79.
Sun X, Cao Y, Yang Z, Xu C, Li X, Wang S, Zhang Q (2004). Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase- like protein. Plant J. 37(4): 517-527. DOI: 10.1046/j.1365-313X.2003.01976.x.
Xiang Y, Cao Y, Xu C, Li X, Wang S (2006). Xa3, conferring resistance for rice bacterial blight and encoding a receptor kinase-like protein, is the same as Xa26. Theor. Appl. Genet. 113(7): 1347-1355. DOI: 10.1007/s00122-006-0388-x.
Yoshimura S, Yoshimura A, Iwata N, McCouch SR, Abenes ML, Baraoidan MR, Mew TW, Nelson RJ (1995). Tagging and combining bacterial blight resistance genes in rice using RAPD and RFLP markers. Mol. Breed. 1(4): 375-387. DOI: 10.1007/BF01248415.
Yoshimura S, Yoshimura A, Saito A, Kishimoto N, Kawase M, Yano M, Nakagahra M, Ogawa T, Iwata N (1992). RFLP analysis of introgressed chromosomal segments in three near-isogenic lines of rice for bacterial blight resistance genes, Xa-1, Xa-3 and Xa-4. Jpn. J. Genet. 67: 29-37. DOI: 10.1266/jjg.67.29.
