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Molecular Diagnosis and Diversity for Regulated Xanthomonas
Bacterial virulence factors
This DokuWiki is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology)
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Oryzabase - Search for Xa/xa resistance genes
Breeding for disease resistance in rice: Bacterial blight
| Pathogen | Resistance gene | Brief description | Status (identified, mapped, cloned, sequenced) | Reference |
|---|---|---|---|---|
| X. oryzae pv. oryzae | Xa1 | Source: Rice cultivar 'Kogyoku'; NB-LRR class protein | Sequenced | Yoshimura et al. 1998 |
| X. oryzae pv. oryzae | Xa2 | Source: Rice cultivar 'Tetep' | Mapped | He et al. 2006 |
| X. oryzae pv. oryzae | Xa3 | Identical to Xa26; NB-LRR class protein | Sequenced | Xiang et al. 2006 |
| X. oryzae pv. oryzae | Xa4 | Cell wall-associated kinase | Sequenced | Wang et al. 2001 Hu et al. 2017 |
| X. oryzae pv. oryzae | xa5 | Plant transcription factor, recessive allele of OsTFIIAgamma5 encoding a second form of the TFIIA small subunit | Sequenced | Iyer & McCouch 2004 |
| X. oryzae pv. oryzae | Xa6 | Identical to Xa3 | Ogawa et al. 1986 | |
| X. oryzae pv. oryzae | Xa7 | Identified | Lee & Kush 2000 | |
| X. oryzae pv. oryzae | xa8 | Mapped | Singh et al., 2002 Vikal et al. 2014 |
|
| X. oryzae pv. oryzae | xa9 | |||
| X. oryzae pv. oryzae | Xa10 | Sequenced | Tian et al. 2014 | |
| X. oryzae pv. oryzae | Xa11 | Mapped | Goto et al. 2009 | |
| X. oryzae pv. oryzae | Xa12 (Xa-kg) | Yamada 1984 | ||
| X. oryzae pv. oryzae | xa13 | Chu et al. 2006 Yang et al. 2006 |
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| X. oryzae pv. oryzae | Xa14 | Taura et al. 1987 | ||
| X. oryzae pv. oryzae | Xa15 | |||
| X. oryzae pv. oryzae | Xa16 | Te-tep | Identified | Noda & Ohuchi 1989 |
| X. oryzae pv. oryzae | Xa17 | Asominori | Identified | Ogawa et al. 1989, Japan. J. Breed. 39(Suppl. 1): 196-197 |
| X. oryzae pv. oryzae | Xa18 | Toyonishiki | Identified | Yamamoto & Ogawa 1989 |
| X. oryzae pv. oryzae | xa19 | Source: XM5, a rice mutant line derived from resistant N-methyl-N-nitrosourea-treated plants | Identified | Taura et al. 1991 |
| X. oryzae pv. oryzae | xa20 | Source: XM6, a rice mutant line derived from resistant N-methyl-N-nitrosourea-treated plants | Identified | Taura et al. 1992 |
| X. oryzae pv. oryzae | Xa21 | Resistance gene against several Xoo races | Sequenced | Song et al. 1995 |
| X. oryzae pv. oryzae | Xa22(t) | Source: Zhachabglong (ZCL), a regional rice variety from Yunnan province | Mapped | Wang et al. 2003 |
| X. oryzae pv. oryzae | Xa23 | Sequenced | Wang et al. 2014 | |
| X. oryzae pv. oryzae | xa24 | Khush & Angeles 1999 Lee et al. 2000 |
||
| X. oryzae pv. oryzae | Xa25 | Source: Somaclonal mutant HX-3 (indica) | Gao et al. 2002 Gao & Su 2013 |
|
| X. oryzae pv. oryzae | Xa25 | Chen et al. 2002 Liu et al. 2011 |
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| X. oryzae pv. oryzae | Xa26 | Sun et al. 2004 | ||
| X. oryzae pv. oryzae | Xa27 | Source: Tetraploid wild rice Oryza minuta | Sequences | Gu et al. 2004 Gu et al. 2005 |
| X. oryzae pv. oryzae | xa26(t) | Source: Cultivar Nep Bha Bong To | Identified | Lee et al. 2003 |
| X. oryzae pv. oryzae | Xa27(t) | Source: Cultivar Arai Raj | Identified | Lee et al. 2003 |
| X. oryzae pv. oryzae | xa28(t) | Source: Cultivar Lota Sail | Identified | Lee et al. 2003 |
| X. oryzae pv. oryzae | Xa29 | Source: Wild rice Oryza officinalis | Mapped | Tan et al. 2004, Acta Genetica Sinica 31(7): 724-729 |
| X. oryzae pv. oryzae | Xa30(t) | Mapped | Jin et al. 2007, Sci. Agric. Sin. 40: 1094-1100 | |
| X. oryzae pv. oryzae | Xa31(t) | Source: Zhachabglong (ZCL), a regional rice variety from Yunnan province | Mapped | Wang et al. 2009 |
| X. oryzae pv. oryzae | Xa32(t) | Mapped | Zheng et al. 2009 | |
| X. oryzae pv. oryzae | Xa33 | Source: Oryza nivara (accession IRGC 105710) | Mapped | Kumar et al. 2012 |
| X. oryzae pv. oryzae | xa34(t) | Source: Oryza sativa ssp. indica cultivar BG1222 | Mapped | Chen et al. 2011 |
| X. oryzae pv. oryzae | Xa35(t) | Source: Oryza minuta | Mapped | Guo et al. 2010, Sci. Agric. Sin. 43(13): 2611-2618 |
| X. oryzae pv. oryzae | Xa36(t) | Source: Rice germplasm C4059 | Mapped | Miao et al. 2010, Sci. Agric. Sin. 43(15): 3051-3058 |
| X. oryzae pv. oryzae | xa37(t) | Promoter variant of Os12aN3 | Antony 2010, Dissertation Kansas State University | |
| X. oryzae pv. oryzae | Xa38 | Source: Oryza nivara (accession IRGC 81825) | Mapped | Cheema et al. 2008 Bhasin et al. 2012 Ellur et at. 2016 |
| X. oryzae pv. oryzae | Xa39 | Source: Rice introgression line (IL) FF329 | Mapped | Zhang et al. 2014 Zhang et al. 2015 |
| X. oryzae pv. oryzae | Xa40 | Source: Oryza sativa subsp. indica donor line IR65482-7-216-1-2 | Mapped | Kim et al. 2015 |
| X. oryzae pv. oryzae | xa41(t) | Source: Oryza glaberrima and some Oryza barthii accessions | Sequenced | Hutin et al. 2015 |
| X. oryzae pv. oryzae | xa42 | Source: XM14, a rice mutant line derived from resistant N-methyl-N-nitrosourea-treated IR24 | Mapped | Busungu et al. 2016 Busungu et al. 2018 |
| X. oryzae pv. oryzae | xa42(t) | Source: Rice cultivar Baixiangzhan | Mapped | Liang et al. 2016 |
| X. oryzae pv. oryzae | Xa43(t) | QTL qBB11 | Mapped | Kim & Reinke 2019 |
| X. oryzae pv. oryzae | xa44(t) | Major QTL qBB_11 on chromosome 11 | Mapped | Kim 2018 |
