User Tools

Site Tools


Sidebar

Learn about COST & EuroXanth


Molecular Diagnosis and Diversity for Regulated Xanthomonas


Bacterial virulence factors


Plant resistance genes


List of contributors


Disclaimer

Privacy policy


DokuWiki Syntax


This DokuWiki is based upon work from COST Action CA16107 EuroXanth, supported by COST (European Cooperation in Science and Technology)


Follow EuroXanth on Twitter, ResearchGate or Scoop.it!

bacteria:t3e:xopaj

This is an old revision of the document!


XopAJ

Authors: Ralf Koebnik & Trainees from the 2nd EuroXanth Training School (Daiva Burokienė, Edyta Đermić, Dagmar Stehlikova, Mariya Stoyanova)
Internal reviewer: Joël F. Pothier
Expert reviewer: FIXME

Class: XopAJ
Family: XopAJ
Prototype: XopAJ (Xanthomonas oryzae pv. oryzicola; strain BLS256)
RefSeq ID: WP_014504815.1 (obsolete version suggested to be replaced by WP_153816726.1) (421 aa)
Synonym: AvrRxo1
3D structure: 4Z8Q, 4Z8T, 4Z8U, 4Z8V (Han et al., 2015)

Biological function

How discovered?

Maize lines that contain the single dominant gene Rxo1 exhibit a rapid hypersensitive response (HR) after infiltration with the rice bacterial streak pathogen Xanthomonas oryzae pv. oryzicola (Xoc), but not with the rice bacterial blight pathogen X. oryzae pv. oryzae (Xoo) (Zhao et al., 2004). The avirulence effector gene that corresponds to Rxo1, designated avrRxo1, was identified in an Xoc genomic library (Zhao et al., 2004).

(Experimental) evidence for being a T3E

When expressed in an Xoo hrpC mutant that is deficient in the type III secretion system, avrRxo1 did not elicit the HR, indicating that the avrRxo1-Rxo1 interaction is dependent on type III secretion (Zhao et al., 2004). Transient expression in maize lines carrying Rxo1 resulted in cell death, suggesting that AvrRxo1 functions from inside maize cells to elicit Rxo1-dependent pathogen recognition (Zhao et al., 2004).

Regulation

No data available.

Phenotypes

  • When introduced into Xoo, clones containing avrRxo1 induced an HR on maize with Rxo1, but not on maize without Rxo1 (Zhao et al., 2004).
  • Rxo1 has a nucleotide-binding site-leucine-rich repeat structure, similar to many previously identified R genes (Zhao et al., 2005). Rxo1 functions after transfer as a transgene to rice, demonstrating the feasibility of nonhost R gene transfer between cereals (Zhao et al., 2005; Xie et al., 2007).
  • AvrRxo1 was found to be cytotoxic when expressed in yeast and caused chlorosis and patches of cell death in the infiltrated leaf areas upon transient expression in tomato and Nicotiana benthamiana (Salomon et al., 2011).
  • Variants of AvrRxo1 were found to suppress the HR caused by the non-host resistance recognition of Xoo by N. benthamiana (Liu et al., 2014).
  • Among four avrRxo1 alleles from different Xoc strains, it was concluded that the toxicity is abolished by a single amino acid substitution at residue 344 in two AvrRxo1 variants (Liu et al., 2014).
  • The ATP/GTP binding site motif A and the NLS are required for both the avirulence activity and the suppression of non-host resistance (Liu et al., 2014).
  • AvrRxo1 has a T4 polynucleotide kinase domain, and expression of AvrRxo1 suppresses bacterial growth in a manner dependent on the kinase motif (Han et al., 2015).
  • The gene product of the adjacent gene, AvrRxo1-ORF2 aka Arc1, functions to suppress the bacteriostatic activity of AvrRxo1 in bacterial cells (Han et al., 2015).
  • AvrRxo1 and its binding partner Arc1 function as a toxin-antitoxin system when expressed in Escherichia coli (Triplett et al., 2016).
  • XopAJXcv85-10 inhibited activation of a PTI-inducible promoter by the bacterial peptide elf18 in Arabidopsis protoplasts and by flg22 in tomato protoplasts. This effector inhibited flg22-induced callose deposition in planta and enhanced disease symptoms caused by attenuated Pseudomonas syringae bacteria (Popov et al., 2016).
  • Mutation of the catalytic aspartic acid residue D193 abolished AvrRxo1 kinase activity and several phenotypes of AvrRxo1, including toxicity in yeast, bacteria, and plants, suppression of the flg22-triggered ROS burst, and ability to trigger an R gene-mediated hypersensitive response. A mutation in the Walker A ATP-binding motif abolished the toxicity of AvrRxo1, but did not abolish the 3'-NADP production, virulence enhancement, ROS suppression, or HR-triggering phenotypes of AvrRxo1. These results demonstrated that AvrRxo1 targets the central metabolite and redox carrier NAD in planta, and that this catalytic activity is required for toxicity and suppression of the ROS burst (Shidore et al., 2017).
  • AvrRxo1 targets the cysteine protease RD21A, which is required for drought-induced immunity (Liu et al., 2020).

Localization

Transient expression of avrRxo1 in onion cells after biolistic delivery revealed that the protein product was associated with the plasma membrane (Zhao et al., 2004).

Enzymatic function

AvrRxo1 has a T4 polynucleotide kinase domain (Han et al., 2015; Wu et al., 2015).

AvrRxo1 is an authentic phosphotransferase that produces two novel metabolites by phosphorylating nicotinamide/nicotinic acid adenine dinucleotide at the adenosine 3'-hydroxyl group. Both products of AvrRxo1, 3'-NADP and 3'-nicotinic acid adenine dinucleotide phosphate (3'-NAADP), had been used before as inhibitors or signaling molecules but were regarded as “artificial” compounds until then (Schuebel et al., 2016).

AvrRxo1 was also found to phosphorylate NAD in planta, and that its kinase catalytic sites are necessary for its toxic and resistance-triggering phenotypes (Shidore et al., 2017). 3'-NADP accumulated upon transient expression of AvrRxo1 in N. benthamiana and in rice leaves infected with avrRxo1-expressing strains of X. oryzae (Shidore et al., 2017).

Interaction partners

Molecular modeling was used to decipher structural mechanisms of AvrRxo1-Rxo1 interaction (Bahadur & Basak, 2014).

The gene product of the adjacent gene, AvrRxo1-ORF2 aka Arc1, binds AvrRxo1, but binding is structurally different from typical effector-binding chaperones, in that it has a distinct fold containing a novel kinase-binding domain (Han et al., 2015).

AvrRxo1 interacts with both the ubiquitin E3 ligase SINAT4 and the cysteine protease RD21A, enhancing SINAT4 activity, thus promoting the degradation of RD21A in vivo (Liu et al., 2020).

Conservation

In xanthomonads

Yes (e.g. X. alfalfae, X. axonopodis, X. bromi, X. euvesicatoria, X. oryzae, X. translucens).

AvrRxo1 appears to be widely conserved in Asian strains of Xoc but much less present in African strains, which implies that deployment of Rxo1-containing varieties may not be an appropriate breeding strategy for controlling bacterial leaf streak disease in Africa (Wonni et al., 2014).

In other plant pathogens/symbionts

Yes (Acidovorax spp., Burkholderia andropogonis) (Triplett et al., 2016).

References

Bahadur RP, Basak J (2014). Molecular modeling of protein-protein interaction to decipher the structural mechanism of nonhost resistance in rice. J. Biomol. Struct. Dyn. 32: 669-681. DOI: 10.1080/07391102.2013.787370

Han Q, Zhou C, Wu S, Liu Y, Triplett L, Miao J, Tokuhisa J, Deblais L, Robinson H, Leach JE, Li J, Zhao B (2015). Crystal structure of Xanthomonas AvrRxo1-ORF1, a type III effector with a polynucleotide kinase domain, and its interactor AvrRxo1-ORF2. Structure 23: 1900-1909. DOI: 10.1016/j.str.2015.06.030

Liu H, Chang Q, Feng W, Zhang B, Wu T, Li N, Yao F, Ding X, Chu Z (2014). Domain dissection of AvrRxo1 for suppressor, avirulence and cytotoxicity functions. PLoS One 9: e113875. DOI: 10.1371/journal.pone.0113875

Liu Y, Wang K, Cheng Q, Kong D, Zhang X, Wang Z, Wang Q, Qi X, Yan J, Chu J, Ling H, Li Q, Miao J, Zhao B (2020). Cysteine protease RD21A regulated by E3 ligase SINAT4 is required for drought-induced resistance to Pseudomonas syringae in Arabidopsis. J. Exp. Bot., eraa255 (in press). DOI: 10.1093/jxb/eraa255

Popov G, Fraiture M, Brunner F, Sessa G (2016). Multiple Xanthomonas euvesicatoria type III effectors inhibit flg22-triggered immunity. Mol. Plant Microbe Interact. 29: 651-660. DOI: 10.1094/MPMI-07-16-0137-R

Salomon D, Dar D, Sreeramulu S, Sessa G (2011). Expression of Xanthomonascampestris pv. vesicatoria type III effectors in yeast affects cell growth and viability. Mol. Plant Microbe Interact. 24: 305-314. DOI: 10.1094/MPMI-09-10-0196

Schuebel F, Rocker A, Edelmann D, Schessner J, Brieke C, Meinhart A (2016). 3'-NADP and 3'-NAADP, two metabolites formed by the bacterial type III effector AvrRxo1. J. Biol. Chem. 291: 22868-22880. DOI: 10.1074/jbc.M116.751297

Shidore T, Broeckling CD, Kirkwood JS, Long JJ, Miao J, Zhao B, Leach JE, Triplett LR (2017). The effector AvrRxo1 phosphorylates NAD in planta. PLoS Pathog. 13: e1006442. DOI: 10.1371/journal.ppat.1006442

Triplett LR, Shidore T, Long J, Miao J, Wu S, Han Q, Zhou C, Ishihara H, Li J, Zhao B, Leach JE (2016). AvrRxo1 Is a bifunctional type III secreted effector and toxin-antitoxin system component with homologs in diverse environmental contexts. PLoS One 11: e0158856. DOI: 10.1371/journal.pone.0158856

Wonni I, Cottyn B, Detemmerman L, Dao S, Ouedraogo L, Sarra S, Tekete C, Poussier S, Corral R, Triplett L, Koita O, Koebnik R, Leach J, Szurek B, Maes M, Verdier V (2014). Analysis of Xanthomonas oryzae pv. oryzicola population in Mali and Burkina Faso reveals a high level of genetic and pathogenic diversity. Phytopathology 104: 520-531. DOI: 10.1094/PHYTO-07-13-0213-R

Wu S (2015). Structural and functional characterization of a Xanthomonas type III effector. PhD dissertation. Link: https://vtechworks.lib.vt.edu/handle/10919/73219

Xie XW, Yu J, Xu JL, Zhou YL, Li ZK (2007). Introduction of a non-host gene Rxo1 cloned from maize resistant to rice bacterial leaf streak into rice varieties. Sheng Wu Gong Cheng Xue Bao [Chinese J. Biotechnol.] 23: 607-611. DOI: 10.1016/S1872-2075(07)60039-9

Zhao B, Ardales EY, Raymundo A, Bai J, Trick HN, Leach JE, Hulbert SH (2004). The avrRxo1 gene from the rice pathogen Xanthomonas oryzae pv. oryzicola confers a nonhost defense reaction on maize with resistance gene Rxo1. Mol. Plant Microbe Interact. 17: 771-779. DOI: 10.1094/MPMI.2004.17.7.771

Zhao B, Lin X, Poland J, Trick H, Leach J, Hulbert S (2005). A maize resistance gene functions against bacterial streak disease in rice. Proc. Natl. Acad. Sci. USA 102: 15383-15388. DOI: 10.1073/pnas.0503023102

bacteria/t3e/xopaj.1597359136.txt.gz · Last modified: 2020/08/14 00:52 by jfpothier